RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 FCGR2CP31995 323 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 RBMXP38159 391 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 PSMB2P49721 201 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 TAS2R46P59540 309 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 RPS21P63220 83 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 DCDP81605 110 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 CATR1Q13166 79 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 PEA15Q15121 130 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 CST6Q15828 149 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 SP6Q3SY56 376 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 ABCA11PQ4W5N1 156 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 AMMECR1LQ6DCA0 310 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 LCN15Q6UWW0 184 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 TMEM14EPQ6UXP3 125 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 UNQ9165/PRO28630Q6UXU0 137 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FAM19A3Q7Z5A8 133 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 SLC22A24Q8N4F4 322 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 RNF175Q8N4F7 328 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 OR11H7Q8NGC8 314 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 OR5D14Q8NGL3 314 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 OR9G1Q8NH87 305 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 S100ZQ8WXG8 99 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FAM3DQ96BQ1 224 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 ERMAPQ96PL5 475 aaPredicted RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 PAXXQ9BUH6 204 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF436Q9C0F3 470 aaPredicted RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 MED28Q9H204 178 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 CA10Q9NS85 328 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF586Q9NXT0 402 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 LAMTOR3Q9UHA4 124 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 NUFIP1Q9UHK0 495 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FUT9Q9Y231 359 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 NEUROG3Q9Y4Z2 214 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 NEO1Q92859 1461 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 PHF3Q92576 2039 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 TOPBP1Q92547 1522 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 SIPA1L1O43166 1804 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 A0A0B4J2A0 478 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 IGHV4-61A0A0C4DH41 118 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 A0A0J9YXV3 536 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 LOC389332A0A1B0GUA5 103 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 MEIS3P1A6NDR6 274 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 F5H5P2 479 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 UPK2O00526 184 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 PDCD5O14737 125 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ANGPTL7O43827 346 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 IGHV4-59P01825 116 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 OR5AC1P0C628 307 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 SPINK8P0C7L1 97 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 GZMBP10144 247 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 HIST1H1DP16402 221 aaKnown RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF83P51522 516 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 CRYBA2P53672 197 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 DIO3P55073 304 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 KRTAP10-1P60331 282 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 DEFA5Q01523 94 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 MLF2Q15773 248 aaPredicted RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 LCN12Q6JVE5 192 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF705AQ6ZN79 300 aaPredicted RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TMUB2Q71RG4 321 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF429Q86V71 674 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 PRR15Q8IV56 129 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF584Q8IVC4 421 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 SVBPQ8N300 66 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TTC9CQ8N5M4 171 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 LINC00337Q8N6G1 96 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ZIC4Q8N9L1 334 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TMEM75Q8N9X5 138 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 SUMF2Q8NBJ7 301 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 OR2A12Q8NGT7 310 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 OR52P1PQ8NH57 321 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 FRZBQ92765 325 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 GPX7Q96SL4 187 aaPredicted RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 NMNAT3Q96T66 252 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 SDF2Q99470 211 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 MIEN1Q9BRT3 115 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TSSK6Q9BXA6 273 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 MRPL20Q9BYC9 149 aaKnown RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 COMMD5Q9GZQ3 224 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TMEM191AQ9H0A3 160 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 POLR2J3Q9H1A7 115 aaKnown RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 C11orf68Q9H3H3 251 aaKnown RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TCEAL2Q9H3H9 227 aaPredicted RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 OTORQ9NRC9 128 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TAS2R8Q9NYW2 309 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF629Q9UEG4 869 aaPredicted RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 SHPKQ9UHJ6 478 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 CCDC88AQ3V6T2 1871 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 MYH13Q9UKX3 1938 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 EPRSP07814 1512 aaKnown RBP2.36□□□□□ -2.03
TVP23B-205ENST00000572845 TRIP11Q15643 1979 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 GLI3P10071 1580 aa2.36□□□□□ -2.03
TVP23B-205ENST00000572845 DOCK6Q96HP0 2047 aa2.35□□□□□ -2.03
TVP23B-205ENST00000572845 HFM1A2PYH4 1435 aa2.35□□□□□ -2.03
TVP23B-205ENST00000572845 THSD7AQ9UPZ6 1657 aa2.35□□□□□ -2.03
TVP23B-205ENST00000572845 ERVK-7P63135 1459 aa2.35□□□□□ -2.03
TVP23B-205ENST00000572845 FANCD2Q9BXW9 1451 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms