RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 CXorf1O96002 111 aa13.27□□□□□ -0.29
POLR2A-201ENST00000572844 SAA1P0DJI8 122 aaPredicted RBP13.27□□□□□ -0.29
POLR2A-201ENST00000572844 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
POLR2A-201ENST00000572844 MIC13Q5XKP0 118 aa13.27□□□□□ -0.29
POLR2A-201ENST00000572844 ST6GALNAC6Q969X2 333 aa13.27□□□□□ -0.29
POLR2A-201ENST00000572844 PCGF1Q9BSM1 259 aa13.27□□□□□ -0.29
POLR2A-201ENST00000572844 ZNRD1Q9P1U0 126 aa13.27□□□□□ -0.29
POLR2A-201ENST00000572844 TRBV24-1A0A075B6N3 115 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 TRBV23-1A0A0A0MS06 115 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 ZNF98A6NK75 572 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 F6UZH7 168 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 AP4M1O00189 453 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 S100A8P05109 93 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 RPL23P62829 140 aaKnown RBP13.26□□□□□ -0.29
POLR2A-201ENST00000572844 NABP2Q9BQ15 211 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 SPTBN4Q9H254 2564 aa13.26□□□□□ -0.29
POLR2A-201ENST00000572844 TGIF2-C20orf24A0A0A6YYL0 155 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 CHRNB4P30926 498 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 B2MP61769 119 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 PRR20EP86478 221 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 PRR20CP86479 221 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 PRR20DP86480 221 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 PRR20BP86481 221 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 PRR20AP86496 221 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 ST6GALNAC3Q8NDV1 305 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 OR9G1Q8NH87 305 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 VSTM2AQ8TAG5 236 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 NANPQ8TBE9 248 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 TMEM167AQ8TBQ9 72 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 RPUSD4Q96CM3 377 aaKnown RBP13.25□□□□□ -0.29
POLR2A-201ENST00000572844 FLYWCH2Q96CP2 140 aaKnown RBP13.25□□□□□ -0.29
POLR2A-201ENST00000572844 HARBI1Q96MB7 349 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 DEFA4P12838 97 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 MYOD1P15172 320 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 USF1P22415 310 aaPredicted RBP13.25□□□□□ -0.29
POLR2A-201ENST00000572844 KLRB1Q12918 225 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 ZNF674Q2M3X9 581 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 OR10X1Q8NGY0 326 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 HINT2Q9BX68 163 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 PATZ1Q9HBE1 687 aaKnown RBP13.25□□□□□ -0.29
POLR2A-201ENST00000572844 URGCP-MRPS24S4R325 110 aa13.25□□□□□ -0.29
POLR2A-201ENST00000572844 MAP1BP46821 2468 aaKnown RBP13.24□□□□□ -0.29
POLR2A-201ENST00000572844 RHOBP62745 196 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 ADIRFQ15847 76 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 SPNS3Q6ZMD2 512 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 STPG3Q8N7X2 389 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 TNFRSF14Q92956 283 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 NDUFA4L2Q9NRX3 87 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 POLEQ07864 2286 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 TNCP24821 2201 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 MEOX2P50222 304 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 FABP9Q0Z7S8 132 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 ANAPC16Q96DE5 110 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 FAM210BQ96KR6 192 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 TCEAL7Q9BRU2 100 aa13.24□□□□□ -0.29
POLR2A-201ENST00000572844 ARL14EPLP0DKL9 152 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 IGHV1-8P0DP01 117 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
POLR2A-201ENST00000572844 IL3RAP26951 378 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 MC5RP33032 325 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 RPL8P62917 257 aaKnown RBP13.23□□□□□ -0.29
POLR2A-201ENST00000572844 SSMEM1Q8WWF3 244 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 PYGO2Q9BRQ0 406 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 COMMD5Q9GZQ3 224 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 DOK5Q9P104 306 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 WASHC3Q9Y3C0 194 aa13.23□□□□□ -0.29
POLR2A-201ENST00000572844 A0A1W2PN81 502 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 NPPCP23582 126 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 CHRNA7P36544 502 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 KIAA0141Q14154 515 aaPredicted RBP13.22□□□□□ -0.29
POLR2A-201ENST00000572844 PNKDQ8N490 385 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 C11orf42Q8N5U0 333 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 ABHD5Q8WTS1 349 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 CACNG8Q8WXS5 425 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 SLC35E1Q96K37 410 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 CLN5O75503 358 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 PFN1P07737 140 aaKnown RBP13.22□□□□□ -0.29
POLR2A-201ENST00000572844 LINC00869P0C866 280 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 IGFBP2P18065 325 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 GPX4P36969 197 aaPredicted RBP13.22□□□□□ -0.29
POLR2A-201ENST00000572844 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
POLR2A-201ENST00000572844 C16orf82Q7Z2V1 217 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 C12orf57Q99622 126 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 TMEM204Q9BSN7 226 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 RALYQ9UKM9 306 aaKnown RBP13.22□□□□□ -0.29
POLR2A-201ENST00000572844 ARL2-SNX15V9GYD0 113 aa13.22□□□□□ -0.29
POLR2A-201ENST00000572844 CCL21O00585 134 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 PLAUP00749 431 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 GNB1P62873 340 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 CD69Q07108 199 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 LINC01560Q8TB33 94 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 C19orf24Q9BVV8 132 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 TMEM133Q9H2Q1 129 aa13.21□□□□□ -0.29
POLR2A-201ENST00000572844 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms