RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TAS2R31P59538 309 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 TAS2R46P59540 309 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 RPL8P62917 257 aaKnown RBP5.68□□□□□ -1.5
NUP88-205ENST00000572809 RHOGP84095 191 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 ZNF45Q02386 682 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 RPEL1Q2QD12 228 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 OR4A47Q6IF82 309 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 C11orf87Q6NUJ2 197 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 MZT2AQ6P582 158 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 ANKRD13BQ86YJ7 626 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 FAM223AQ8IWN6 122 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 NECAP1Q8NC96 275 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 OR9G4Q8NGQ1 327 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 OR4A5Q8NH83 315 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 GPX8Q8TED1 209 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 HRASLSQ9HDD0 168 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 BET1LQ9NYM9 111 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 ANAPC10Q9UM13 185 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 ZNF257Q9Y2Q1 563 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 TNCP24821 2201 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 FAM25AB3EWG3 89 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 FAM25CB3EWG5 89 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 FAM25GB3EWG6 89 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 UPK2O00526 184 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 OR2J3O76001 311 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 DHFRP00374 187 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 IGLV1-51P01701 117 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 CRYGCP07315 174 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 ZNF182P17025 639 aaPredicted RBP5.67□□□□□ -1.5
NUP88-205ENST00000572809 HLA-GP17693 338 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 F2RP25116 425 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 SYNJ2BPP57105 145 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 TSPAN5P62079 268 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 EXOSC2Q13868 293 aaKnown RBP5.67□□□□□ -1.5
NUP88-205ENST00000572809 CTF1Q16619 201 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 POU2AF1Q16633 256 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 AADACL3Q5VUY0 350 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 GPR107Q5VW38 600 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 LPCAT3Q6P1A2 487 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 SNX29P2Q8IUI4 249 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 CMTM1Q8IZ96 169 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 DMBX1Q8NFW5 382 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 OR51H1Q8NH63 302 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 MOB3AQ96BX8 217 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 ASCL2Q99929 193 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 NAA50Q9GZZ1 169 aaKnown RBP5.67□□□□□ -1.5
NUP88-205ENST00000572809 PLEKHA2Q9HB19 425 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 SCPEP1Q9HB40 452 aa5.67□□□□□ -1.5
NUP88-205ENST00000572809 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.66□□□□□ -1.5
NUP88-205ENST00000572809 TRAV3A0A0B4J244 114 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 A0A1B0GW64 132 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 CGB1A6NKQ9 187 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 H0Y980 276 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 BMPR1BO00238 502 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 GPR31O00270 319 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 S1PR2O95136 353 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 GABARAPO95166 117 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 NDUFB8O95169 186 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 RLN1P04808 185 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 CSN3P07498 182 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 SMIM18P0DKX4 95 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 DEFA4P12838 97 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 MYOD1P15172 320 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 RPA2P15927 270 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 HIST1H1BP16401 226 aaKnown RBP5.66□□□□□ -1.5
NUP88-205ENST00000572809 CTRB1P17538 263 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 PSMB6P28072 239 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 S100GP29377 79 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 HRH1P35367 487 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 LPAR6P43657 344 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 NHLH2Q02577 135 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 C15orf32Q32M92 178 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 CTRB2Q6GPI1 263 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 IL34Q6ZMJ4 242 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 HAPLN4Q86UW8 402 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 AP3S1Q92572 193 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 DGCR14Q96DF8 476 aaKnown RBP5.66□□□□□ -1.5
NUP88-205ENST00000572809 MRPS26Q9BYN8 205 aaKnown RBP5.66□□□□□ -1.5
NUP88-205ENST00000572809 COMMD5Q9GZQ3 224 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 HEYLQ9NQ87 328 aaPredicted RBP5.66□□□□□ -1.5
NUP88-205ENST00000572809 SIGLEC8Q9NYZ4 499 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 COMMD9Q9P000 198 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 PEMTQ9UBM1 199 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 DMRT1Q9Y5R6 373 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 SORL1Q92673 2214 aa5.66□□□□□ -1.5
NUP88-205ENST00000572809 TEX50A0A1B0GTY4 177 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 PPP5D1E7EU14 171 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 GGCTO75223 188 aaKnown RBP5.65□□□□□ -1.5
NUP88-205ENST00000572809 OR2C1O95371 312 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 KRASP01116 189 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 REG1AP05451 166 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 TRAPPC2P0DI81 140 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 TRAPPC2BP0DI82 140 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 AREGP15514 252 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 RCVRNP35243 200 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 OR2B8PP59922 312 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 ERVK-16P61578 105 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 KLK9Q2XQG4 91 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 ZNF585BQ52M93 769 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 CLEC19AQ6UXS0 136 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms