RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 OR51B2Q9Y5P1 312 aa15.39■□□□□ 0.05
NUP88-204ENST00000572290 DNAH9Q9NYC9 4486 aa15.39■□□□□ 0.05
NUP88-204ENST00000572290 IGLV1-51P01701 117 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 SERPINE2P07093 398 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 GP9P14770 177 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 PI3P19957 117 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 SCGB2B2Q4G0G5 96 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 IL34Q6ZMJ4 242 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 HAPLN4Q86UW8 402 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 OR10W1Q8NGF6 305 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 EEF1AKMT3Q96AZ1 226 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 HINT2Q9BX68 163 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 NDUFA4L2Q9NRX3 87 aa15.38■□□□□ 0.05
NUP88-204ENST00000572290 CCDC160A6NGH7 325 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 IGKV1-39P01597 117 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 IGHV3-23P01764 117 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 IGKV1D-39P04432 117 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 OR13C7P0DN81 318 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 PIGPP57054 158 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 MEF2DQ14814 521 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 MCFD2Q8NI22 146 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 ZFAND1Q8TCF1 268 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 SEC22AQ96IW7 307 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 FKBP11Q9NYL4 201 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 PEMTQ9UBM1 199 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 DMRT1Q9Y5R6 373 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 S4R3C0 116 aa15.37■□□□□ 0.05
NUP88-204ENST00000572290 PPP5D1E7EU14 171 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 CYB5BO43169 146 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 GGCTO75223 188 aaKnown RBP15.36■□□□□ 0.05
NUP88-204ENST00000572290 WT1-ASQ06250 92 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 CLEC19AQ6UXS0 136 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 H2BFWTQ7Z2G1 175 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 GDPD1Q8N9F7 314 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 OR5B3Q8NH48 314 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 LSM10Q969L4 123 aaKnown RBP15.36■□□□□ 0.05
NUP88-204ENST00000572290 MRGPRFQ96AM1 343 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 CXorf58Q96LI9 332 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 CCDC140Q96MF4 163 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 NXF2Q9GZY0 626 aaKnown RBP15.36■□□□□ 0.05
NUP88-204ENST00000572290 SIGLEC8Q9NYZ4 499 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 THYN1Q9P016 225 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 COPZ2Q9P299 210 aa15.36■□□□□ 0.05
NUP88-204ENST00000572290 RSL24D1Q9UHA3 163 aaKnown RBP15.36■□□□□ 0.05
NUP88-204ENST00000572290 C15orf61A6NNL5 157 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 DISC1C4P0D8 188 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 H0Y980 276 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 CSN3P07498 182 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 TNFSF8P32971 234 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 FAAP20Q6NZ36 180 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 CCDC71LQ8N9Z2 235 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 OR13C8Q8NGS7 320 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 OR4A16Q8NH70 328 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 MARCH1Q8TCQ1 289 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 TMEM56Q96MV1 263 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 TMEM14BQ9NUH8 114 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 SMAD5-AS1Q9Y6J3 95 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 TNCP24821 2201 aa15.35■□□□□ 0.05
NUP88-204ENST00000572290 TRBV7-1A0A0A6YYK4 115 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 C3orf85A0A1B0GTC6 90 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 FABP12A6NFH5 140 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 MFSD2BA6NFX1 497 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 DBX1A6NMT0 343 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 GSTZ1O43708 216 aaPredicted RBP15.34■□□□□ 0.05
NUP88-204ENST00000572290 OR2C1O95371 312 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 HLA-AP01891 365 aaKnown RBP15.34■□□□□ 0.05
NUP88-204ENST00000572290 CTSDP07339 412 aaPredicted RBP15.34■□□□□ 0.05
NUP88-204ENST00000572290 AKAIN1P0CW23 69 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 ARL3P36405 182 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 TP53RKQ96S44 253 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 SOSTQ9BQB4 213 aa15.34■□□□□ 0.05
NUP88-204ENST00000572290 MECP2P51608 486 aaKnown RBP15.33■□□□□ 0.04
NUP88-204ENST00000572290 SLC25A24Q6NUK1 477 aa15.33■□□□□ 0.04
NUP88-204ENST00000572290 OR4C16Q8NGL9 310 aa15.33■□□□□ 0.04
NUP88-204ENST00000572290 F11RQ9Y624 299 aaKnown RBP15.33■□□□□ 0.04
NUP88-204ENST00000572290 ANKRD20A5PA0PJZ0 165 aa15.32■□□□□ 0.04
NUP88-204ENST00000572290 CLEC3BP05452 202 aa15.32■□□□□ 0.04
NUP88-204ENST00000572290 C11orf87Q6NUJ2 197 aa15.32■□□□□ 0.04
NUP88-204ENST00000572290 GPHB5Q86YW7 130 aa15.32■□□□□ 0.04
NUP88-204ENST00000572290 ZNF502Q8TBZ5 544 aa15.32■□□□□ 0.04
NUP88-204ENST00000572290 C14orf166Q9Y224 244 aaKnown RBP15.32■□□□□ 0.04
NUP88-204ENST00000572290 ATG12O94817 140 aa15.31■□□□□ 0.04
NUP88-204ENST00000572290 SURF2Q15527 256 aaPredicted RBP15.31■□□□□ 0.04
NUP88-204ENST00000572290 TRIM16LQ309B1 348 aa15.31■□□□□ 0.04
NUP88-204ENST00000572290 SP6Q3SY56 376 aa15.31■□□□□ 0.04
NUP88-204ENST00000572290 VN1R17PQ8TDU5 208 aa15.31■□□□□ 0.04
NUP88-204ENST00000572290 PRRT1Q99946 306 aa15.31■□□□□ 0.04
NUP88-204ENST00000572290 RBM38Q9H0Z9 239 aaKnown RBP15.31■□□□□ 0.04
NUP88-204ENST00000572290 LGALS9O00182 355 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 B3GALNT1O75752 331 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 IGKV1-5P01602 117 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 NHLRC4P0CG21 123 aaPredicted RBP15.3■□□□□ 0.04
NUP88-204ENST00000572290 GPR183P32249 361 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 AKR1C2P52895 323 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 HSPE1P61604 102 aaKnown RBP15.3■□□□□ 0.04
NUP88-204ENST00000572290 FAM106AQ4KMX7 169 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 Q8N402 240 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 OR1L6Q8NGR2 347 aa15.3■□□□□ 0.04
NUP88-204ENST00000572290 RTBDNQ9BSG5 229 aaPredicted RBP15.3■□□□□ 0.04
NUP88-204ENST00000572290 UCP1P25874 307 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms