RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ADAMTSL5Q6ZMM2 481 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 Q8N1Y9 231 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 C15orf40Q8WUR7 153 aa13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-207ENST00000572043 IGHV3-35A0A0C4DH35 117 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 NOL3O60936 208 aaKnown RBP13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 RAB3DO95716 219 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 IGKV1-39P01597 117 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 IGKV1D-39P04432 117 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 CLEC3BP05452 202 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 IGHV4-30-4P0DP06 118 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 TMBIM6P55061 237 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 PIGPP57054 158 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 CD300EQ496F6 205 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 FAAP20Q6NZ36 180 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 LHFPL1Q86WI0 220 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 SGPP2Q8IWX5 399 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 Q8N402 240 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 GDPD1Q8N9F7 314 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 TMEM229BQ8NBD8 167 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 DYNC2LI1Q8TCX1 351 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 CACNG8Q8WXS5 425 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 LSM10Q969L4 123 aaKnown RBP13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 CXorf58Q96LI9 332 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 C6orf62Q9GZU0 229 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 NDUFA4L2Q9NRX3 87 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 PRNDQ9UKY0 176 aa13.49□□□□□ -0.25
CTDNEP1-207ENST00000572043 TRBV7-1A0A0A6YYK4 115 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 C2orf70A6NJV1 201 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 GABARAPH6UMI1 98 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 SERPINE2P07093 398 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 FGF2P09038 288 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 RPL5P46777 297 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 TAS2R19P59542 299 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 IL18Q14116 193 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 IZUMO4Q1ZYL8 232 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 H2BFWTQ7Z2G1 175 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 ARRDC1Q8N5I2 433 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 DIRAS2Q96HU8 199 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 WWC2-AS2Q96NR7 200 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 THYN1Q9P016 225 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 CCDC59Q9P031 241 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 KLK9Q9UKQ9 250 aa13.48□□□□□ -0.25
CTDNEP1-207ENST00000572043 C15orf61A6NNL5 157 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 TPPPO94811 219 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 FOLR2P14207 255 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 TBPP20226 339 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 MFAP2P55001 183 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 STEAP1BQ6NZ63 245 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 HSD17B13Q7Z5P4 300 aaPredicted RBP13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 GTSCR1Q86UQ5 136 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 ZNF502Q8TBZ5 544 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 SEC22AQ96IW7 307 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 TP53RKQ96S44 253 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 TSC22D3Q99576 134 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 DNAH9Q9NYC9 4486 aa13.47□□□□□ -0.25
CTDNEP1-207ENST00000572043 TNCP24821 2201 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 H3BMQ9 156 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 CYB5BO43169 146 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 CD74P04233 296 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 SP6Q3SY56 376 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 FAM106AQ4KMX7 169 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 SPINK9Q5DT21 86 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 PLET1Q6UQ28 207 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 OR13C8Q8NGS7 320 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 OR5B3Q8NH48 314 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 MARCH1Q8TCQ1 289 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 ISOC1Q96CN7 298 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 FAM212BQ9NTI7 297 aaPredicted RBP13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 TMEM14BQ9NUH8 114 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 FKBP11Q9NYL4 201 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 COPZ2Q9P299 210 aa13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 F11RQ9Y624 299 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-207ENST00000572043 C3orf85A0A1B0GTC6 90 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 LGALS9O00182 355 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 PTBP1P26599 531 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 RND3P61587 244 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 GUCA2BQ16661 112 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 TRIM16LQ309B1 348 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 DEFB114Q30KQ6 69 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 UNQ9165/PRO28630Q6UXU0 137 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 TERB2Q8NHR7 220 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 BCL7BQ9BQE9 202 aa13.45□□□□□ -0.26
CTDNEP1-207ENST00000572043 TMEM213A2RRL7 107 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 CBLN1P23435 193 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 CD81P60033 236 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 MRPS10P82664 201 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 TM4SF20Q53R12 229 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 CADM3Q8N126 398 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR2K2Q8NGT1 345 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms