RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 TPRKBQ9Y3C4 175 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 PKHD1P08F94 4074 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 OR4C46A6NHA9 309 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 EBAG9O00559 213 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 FCER2P06734 321 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 TFPI2P48307 235 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 RBMS2Q15434 407 aaKnown RBP14.03□□□□□ -0.16
NUP88-203ENST00000572019 POU2AF1Q16633 256 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 PRSS48Q7RTY5 328 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 GVQW1Q8N7I0 195 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 GDPD1Q8N9F7 314 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 OR13F1Q8NGS4 319 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 CSTL1Q9H114 145 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 TMEM140Q9NV12 185 aa14.03□□□□□ -0.16
NUP88-203ENST00000572019 IGKV3-7A0A075B6H7 116 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 NDUFA4O00483 81 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 OR13C7P0DN81 318 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 MYL9P24844 172 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 FCGR2CP31995 323 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 LAMTOR1Q6IAA8 161 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 C22orf42Q6IC83 251 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 SLC25A24Q6NUK1 477 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 SCARB1Q8WTV0 552 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 NRG4Q8WWG1 115 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 QTRT1Q9BXR0 403 aaKnown RBP14.02□□□□□ -0.17
NUP88-203ENST00000572019 APLNQ9ULZ1 77 aa14.02□□□□□ -0.17
NUP88-203ENST00000572019 MPTX1A8MV57 137 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 K7EIM0 57 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 SERPINE2P07093 398 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 RANBP1P43487 201 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 GNG2P59768 71 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
NUP88-203ENST00000572019 COMMD5Q9GZQ3 224 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 C11orf68Q9H3H3 251 aaKnown RBP14.01□□□□□ -0.17
NUP88-203ENST00000572019 NDUFB11Q9NX14 153 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 SMPXQ9UHP9 88 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 ETV7Q9Y603 341 aa14.01□□□□□ -0.17
NUP88-203ENST00000572019 DNAH17Q9UFH2 4485 aa14□□□□□ -0.17
NUP88-203ENST00000572019 IGHV3OR16-13A0A075B7E8 117 aa14□□□□□ -0.17
NUP88-203ENST00000572019 IGHV3-74A0A0B4J1X5 117 aa14□□□□□ -0.17
NUP88-203ENST00000572019 TEX50A0A1B0GTY4 177 aa14□□□□□ -0.17
NUP88-203ENST00000572019 TRDV1A0A1B0GX56 115 aa14□□□□□ -0.17
NUP88-203ENST00000572019 RBFOX2O43251 390 aaKnown RBP eCLIP14□□□□□ -0.17
NUP88-203ENST00000572019 TAS2R31P59538 309 aa14□□□□□ -0.17
NUP88-203ENST00000572019 UBAC2Q8NBM4 344 aa14□□□□□ -0.17
NUP88-203ENST00000572019 OR51H1Q8NH63 302 aa14□□□□□ -0.17
NUP88-203ENST00000572019 C21orf62Q9NYP8 219 aa14□□□□□ -0.17
NUP88-203ENST00000572019 THYN1Q9P016 225 aa14□□□□□ -0.17
NUP88-203ENST00000572019 K7EMT4 169 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 CHEK1O14757 476 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 PPYP01298 95 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 NQO2P16083 231 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 FXYD4P59646 89 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 ARL6IP1Q15041 203 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 ZNF818PQ6ZRF7 136 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 GBGT1Q8N5D6 347 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 LGALS14Q8TCE9 139 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 C2CD4CQ8TF44 421 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 SRSF8Q9BRL6 282 aaKnown RBP13.99□□□□□ -0.17
NUP88-203ENST00000572019 SLC5A7Q9GZV3 580 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
NUP88-203ENST00000572019 DYNC1H1Q14204 4646 aaKnown RBP13.99□□□□□ -0.17
NUP88-203ENST00000572019 A0A1B0GVY2 172 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 HPRT1P00492 218 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 IFNA4P05014 189 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 CTSGP08311 255 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 TRAPPC2P0DI81 140 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 TRAPPC2BP0DI82 140 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 TBCEQ15813 527 aaPredicted RBP13.98□□□□□ -0.17
NUP88-203ENST00000572019 FAM90A2PQ658T7 463 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 ZNF367Q7RTV3 350 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 BEST4Q8NFU0 473 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 RHPN1-AS1Q9BWJ2 59 aa13.98□□□□□ -0.17
NUP88-203ENST00000572019 F11RQ9Y624 299 aaKnown RBP13.98□□□□□ -0.17
NUP88-203ENST00000572019 IGHV7-4-1A0A0J9YVY3 117 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 DBX1A6NMT0 343 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 C15orf62A8K5M9 175 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 IGLL5B9A064 214 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 MSMO1Q15800 293 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 SPSB3Q6PJ21 355 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 FAM24BQ8N5W8 94 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 HINT2Q9BX68 163 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 MFFQ9GZY8 342 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 VCXQ9H320 206 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 NDUFA4L2Q9NRX3 87 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 DAPK2Q9UIK4 370 aa13.97□□□□□ -0.17
NUP88-203ENST00000572019 NOTOA8MTQ0 251 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 ANKRD65E5RJM6 399 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 XRCC3O43542 346 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 CA1P00915 261 aaPredicted RBP13.96□□□□□ -0.17
NUP88-203ENST00000572019 ARPC4P59998 168 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 Q56UQ5 140 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 TMEM17Q86X19 198 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 LILRB2Q8N423 598 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 TMEM116Q8NCL8 245 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 OR5H6Q8NGV6 325 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 SLC25A38Q96DW6 304 aa13.96□□□□□ -0.17
NUP88-203ENST00000572019 PLEKHA2Q9HB19 425 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms