RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 RCVRNP35243 200 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 ARL3P36405 182 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 UBE2KP61086 200 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 OR11H2Q8NH07 326 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 OR4S2Q8NH73 311 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 OR4A5Q8NH83 315 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 GALNT14Q96FL9 552 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 CYYR1Q96J86 154 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 COMMD3Q9UBI1 195 aa8.18□□□□□ -1.1
VPS53-207ENST00000570510 ELF5Q9UKW6 265 aaPredicted RBP8.18□□□□□ -1.1
VPS53-207ENST00000570510 OR2J3O76001 311 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 HRASP01112 189 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 PPYP01298 95 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 CRYGBP07316 175 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 S100GP29377 79 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 FCGR2CP31995 323 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 MAS1LP35410 378 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 UCP3P55916 312 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 CATR1Q13166 79 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 EIF4EBP1Q13541 118 aaPredicted RBP8.17□□□□□ -1.1
VPS53-207ENST00000570510 ZNF585BQ52M93 769 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 LAMTOR1Q6IAA8 161 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 SLC25A42Q86VD7 318 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 OR5B3Q8NH48 314 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 MARC2Q969Z3 335 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 SPAG8Q99932 426 aaPredicted RBP8.17□□□□□ -1.1
VPS53-207ENST00000570510 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 C11orf68Q9H3H3 251 aaKnown RBP8.17□□□□□ -1.1
VPS53-207ENST00000570510 MAP6D1Q9H9H5 199 aa8.17□□□□□ -1.1
VPS53-207ENST00000570510 TMEM213A2RRL7 107 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 DPPA5A6NC42 116 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 MPTX1A8MV57 137 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 CTDSPLO15194 276 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 RTL8CO15255 209 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 DEFB4AO15263 64 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 IGLV2-14P01704 120 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 IGLV2-23P01705 113 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 NFYAP23511 347 aaPredicted RBP8.16□□□□□ -1.1
VPS53-207ENST00000570510 TGFBR1P36897 503 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 LINC00205P59089 165 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 SSBP2P81877 361 aaPredicted RBP8.16□□□□□ -1.1
VPS53-207ENST00000570510 POU2AF1Q16633 256 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 CLEC19AQ6UXS0 136 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 KCTD9Q7L273 389 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 CMTM1Q8IZ96 169 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 ARRDC1Q8N5I2 433 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 OR5H2Q8NGV7 314 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 OR6F1Q8NGZ6 308 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 SRSF12Q8WXF0 261 aaKnown RBP8.16□□□□□ -1.1
VPS53-207ENST00000570510 DEDD2Q8WXF8 326 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 MAFIPQ8WZ33 124 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 MOB3AQ96BX8 217 aa8.16□□□□□ -1.1
VPS53-207ENST00000570510 IGHV4-4A0A075B6R2 117 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 TRBV9A0A0B4J1U6 114 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 B3GALNT1O75752 331 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 EIF4EP06730 217 aaKnown RBP8.15□□□□□ -1.1
VPS53-207ENST00000570510 P0DMU3 169 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 FAM231AP0DMU4 169 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 FAM231CP0DMU5 169 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 MYOD1P15172 320 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 ELK1P19419 428 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 TAS2R31P59538 309 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 HERV-K104P61576 105 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 THOC7Q6I9Y2 204 aaKnown RBP8.15□□□□□ -1.1
VPS53-207ENST00000570510 CLVS1Q8IUQ0 354 aaPredicted RBP8.15□□□□□ -1.1
VPS53-207ENST00000570510 MMD2Q8IY49 270 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 MFSD4AQ8N468 514 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 POM121L12Q8N7R1 296 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 DYNC2LI1Q8TCX1 351 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 ZNF486Q96H40 463 aaPredicted RBP8.15□□□□□ -1.1
VPS53-207ENST00000570510 SRSF8Q9BRL6 282 aaKnown RBP8.15□□□□□ -1.1
VPS53-207ENST00000570510 PLEKHA2Q9HB19 425 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 TAS2R8Q9NYW2 309 aa8.15□□□□□ -1.1
VPS53-207ENST00000570510 MRPL27Q9P0M9 148 aaKnown RBP8.15□□□□□ -1.1
VPS53-207ENST00000570510 IGKV1D-13A0A0B4J2D9 117 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 OR4C46A6NHA9 309 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 LINC00473A8K010 186 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 A8MWP6 167 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 FAM25AB3EWG3 89 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 FAM25CB3EWG5 89 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 FAM25GB3EWG6 89 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 GABARAPH6UMI1 98 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 HPGDSO60760 199 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 HPRT1P00492 218 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 IGKV1-13P0DP09 117 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 PRSS8Q16651 343 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 PVRIGQ6DKI7 326 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 FCAMRQ8WWV6 532 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 EEF1AKMT3Q96AZ1 226 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 SLC5A7Q9GZV3 580 aa8.14□□□□□ -1.11
VPS53-207ENST00000570510 NAA50Q9GZZ1 169 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms