RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	OXLD1	Q5BKU9	147 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	TRIQK	Q629K1	86 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	C18orf65	Q6ZTR6	163 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	OR6Q1	Q8NGQ2	317 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	PDCD10	Q9BUL8	212 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	TMEM14B	Q9NUH8	114 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	OR51B2	Q9Y5P1	312 aa		13.93	□□□□□ -0.18
PKD1-238	ENST00000570150	C15orf61	A6NNL5	157 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	OVOL1	O14753	267 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	CTRB1	P17538	263 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	UCP1	P25874	307 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	CNPY1	Q3B7I2	92 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	CTRB2	Q6GPI1	263 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	RNASE11	Q8TAA1	199 aa	Known RBP	13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	SEC22A	Q96IW7	307 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	OR5B12	Q96R08	314 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	ATP6V0B	Q99437	205 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	TMEM222	Q9H0R3	208 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	GPR132	Q9UNW8	380 aa		13.92	□□□□□ -0.18
PKD1-238	ENST00000570150	TRBV7-1	A0A0A6YYK4	115 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	SEC14L6	B5MCN3	397 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	EGFEM1P	Q0D2K5	195 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	IL22RA2	Q969J5	263 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	EEF1AKMT3	Q96AZ1	226 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	NAA60	Q9H7X0	242 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	NDUFA4L2	Q9NRX3	87 aa		13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	GAR1	Q9NY12	217 aa	Known RBP	13.91	□□□□□ -0.18
PKD1-238	ENST00000570150	IGHV3-11	P01762	117 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	MECP2	P51608	486 aa	Known RBP	13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	KLF9	Q13886	244 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	C15orf32	Q32M92	178 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	C10orf55	Q5SWW7	151 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	TRIM63	Q969Q1	353 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	MRGPRF	Q96AM1	343 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	GALNT14	Q96FL9	552 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	C7orf50	Q9BRJ6	194 aa	Known RBP	13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	AKIP1	Q9NQ31	210 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	FBXL7	Q9UJT9	491 aa		13.9	□□□□□ -0.18
PKD1-238	ENST00000570150	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	TEX50	A0A1B0GTY4	177 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	HMX3	A6NHT5	357 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	CRYM-AS1	A6NIL9	109 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	CDS2	O95674	445 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	APELA	P0DMC3	54 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	PI3	P19957	117 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	HSPE1	P61604	102 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	ERH	P84090	104 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	EXOSC2	Q13868	293 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	ZNF79	Q15937	498 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	RPEL1	Q2QD12	228 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	FOXB2	Q5VYV0	432 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	ZNF57	Q68EA5	555 aa	Predicted RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	CASTOR1	Q8WTX7	329 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	RBPMS	Q93062	196 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	DUX3	Q96PT4	197 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	OR4C12	Q96R67	309 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	C5orf66	Q9H5L9	145 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	BATF3	Q9NR55	127 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	PEMT	Q9UBM1	199 aa		13.89	□□□□□ -0.19
PKD1-238	ENST00000570150	IGHV4OR15-8	A0A075B7B6	117 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150		A0A087WW49	117 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	IGLC7	A0M8Q6	106 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	OR13C7	P0DN81	318 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	HOXD3	P31249	432 aa	Predicted RBP	13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	SUB1	P53999	127 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	FAAP20	Q6NZ36	180 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	C1QL4	Q86Z23	238 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	VN1R17P	Q8TDU5	208 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	TP53RK	Q96S44	253 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	HINT2	Q9BX68	163 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	SRR	Q9GZT4	340 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	PLEKHA3	Q9HB20	300 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	ENY2	Q9NPA8	101 aa		13.88	□□□□□ -0.19
PKD1-238	ENST00000570150	AREG	P15514	252 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	UBE2M	P61081	183 aa	Known RBP	13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	PRCD	Q00LT1	54 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	RBMS2	Q15434	407 aa	Known RBP	13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	TMEM128	Q5BJH2	165 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	OR1P1	Q8NH06	330 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	S100Z	Q8WXG8	99 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	DCUN1D4	Q92564	292 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	PLXNB1	O43157	2135 aa		13.87	□□□□□ -0.19
PKD1-238	ENST00000570150	IGLV11-55	A0A075B6I3	123 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	TRAV3	A0A0B4J244	114 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	DUXB	A0A1W2PPF3	345 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	INS-IGF2	F8WCM5	200 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	CORT	O00230	105 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	GGCT	O75223	188 aa	Known RBP	13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	OR2J3	O76001	311 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	OR5AC1	P0C628	307 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	SNCA	P37840	140 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	KLF5	Q13887	457 aa	Predicted RBP	13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	SLC35G3	Q8N808	338 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	DLX4	Q92988	240 aa	Predicted RBP	13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	F11R	Q9Y624	299 aa	Known RBP	13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	TMEM56-RWDD3	S4R434	201 aa		13.86	□□□□□ -0.19
PKD1-238	ENST00000570150	NOTCH1	P46531	2555 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms