RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PHB2Q99623 299 aa4.33□□□□□ -1.72
UBFD1-209ENST00000569919 LITAFQ99732 161 aa4.33□□□□□ -1.72
UBFD1-209ENST00000569919 RIBC2Q9H4K1 309 aa4.33□□□□□ -1.72
UBFD1-209ENST00000569919 TMEM138Q9NPI0 162 aa4.33□□□□□ -1.72
UBFD1-209ENST00000569919 EXOSC1Q9Y3B2 195 aaKnown RBP4.33□□□□□ -1.72
UBFD1-209ENST00000569919 PEX16Q9Y5Y5 336 aa4.33□□□□□ -1.72
UBFD1-209ENST00000569919 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
UBFD1-209ENST00000569919 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 TRBV9A0A0B4J1U6 114 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 C5orf51A6NDU8 294 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 TMEM212A6NML5 194 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 J3QLW9 94 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 ITGB1BP1O14713 200 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 CD2P06729 351 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF19P17023 458 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 CTRB1P17538 263 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 MAPK3P27361 379 aaPredicted RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 DAPP51397 102 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 RHOGP84095 191 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 PJVKQ0ZLH3 352 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 EXOSC2Q13868 293 aaKnown RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 RPL39P5Q59GN2 51 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 DMKNQ6E0U4 476 aaPredicted RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 CTRB2Q6GPI1 263 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 PDPNQ86YL7 162 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 CENPSQ8N2Z9 138 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 NECAP1Q8NC96 275 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 OR8J1Q8NGP2 316 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 OR5AK2Q8NH90 309 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 KCNG3Q8TAE7 436 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 RNASE8Q8TDE3 154 aaKnown RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 CANT1Q8WVQ1 401 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 MARC2Q969Z3 335 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 FAM46BQ96A09 425 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 C6orf62Q9GZU0 229 aaPredicted RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 C11orf68Q9H3H3 251 aaKnown RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 ABRACLQ9P1F3 81 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 MLXQ9UH92 298 aa4.32□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF230Q9UIE0 474 aaPredicted RBP4.32□□□□□ -1.72
UBFD1-209ENST00000569919 A0A087WZ39 114 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 M0R129 80 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 M0R2N4 97 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 APOA2P02652 100 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 IGKV1-16P04430 117 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 CRYGBP07316 175 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 C8orf88P0DMB2 117 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 P0DMU3 169 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 FAM231AP0DMU4 169 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 FAM231CP0DMU5 169 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 CMC4P56277 68 aaPredicted RBP4.31□□□□□ -1.72
UBFD1-209ENST00000569919 DEFA5Q01523 94 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 MRPL28Q13084 256 aaKnown RBP4.31□□□□□ -1.72
UBFD1-209ENST00000569919 RIPK1Q13546 671 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 LRRC37A5PQ49AS3 106 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 SLC22A6Q4U2R8 563 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 SOHLH1Q5JUK2 328 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 PVRIGQ6DKI7 326 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 SLC25A42Q86VD7 318 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 ACBD7Q8N6N7 88 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF645Q8N7E2 425 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 OR11H2Q8NH07 326 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 OR4A5Q8NH83 315 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 ABHD14BQ96IU4 210 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 FAM218AQ96MZ4 157 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 SPAG8Q99932 426 aaPredicted RBP4.31□□□□□ -1.72
UBFD1-209ENST00000569919 AGMATQ9BSE5 352 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 IFI27L2Q9H2X8 130 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
UBFD1-209ENST00000569919 MRPL27Q9P0M9 148 aaKnown RBP4.31□□□□□ -1.72
UBFD1-209ENST00000569919 A0A087X002 238 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 TRAV10A0A0B4J240 114 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 C15orf61A6NNL5 157 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 MPTX1A8MV57 137 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 A8MWP6 167 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 PPP5D1E7EU14 171 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 CLN5O75503 358 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 IGKV3-20P01619 116 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 IGLV2-23P01705 113 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 HLA-AP01891 365 aaKnown RBP4.3□□□□□ -1.72
UBFD1-209ENST00000569919 GALP22466 123 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
UBFD1-209ENST00000569919 PPP3R1P63098 170 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 CBX3Q13185 183 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 HMGN3Q15651 99 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 C15orf32Q32M92 178 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 DDI2Q5TDH0 399 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 LAMTOR1Q6IAA8 161 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 SYS1Q8N2H4 156 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 TTC9CQ8N5M4 171 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 DRAXINQ8NBI3 349 aaPredicted RBP4.3□□□□□ -1.72
UBFD1-209ENST00000569919 OR13C5Q8NGS8 318 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 MRPL30Q8TCC3 161 aaKnown RBP4.3□□□□□ -1.72
UBFD1-209ENST00000569919 TRUB1Q8WWH5 349 aaKnown RBP4.3□□□□□ -1.72
UBFD1-209ENST00000569919 IL1F10Q8WWZ1 152 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 CACNG8Q8WXS5 425 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 GGHQ92820 318 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 C4orf36Q96KX1 117 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 PDCD1LG2Q9BQ51 273 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms