RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LINC01548A6NM66 108 aa18.45■□□□□ 0.54
RAB40C-212ENST00000569575 NPIPB5A8MRT5 1133 aa18.45■□□□□ 0.54
RAB40C-212ENST00000569575 ERHP84090 104 aaKnown RBP18.45■□□□□ 0.54
RAB40C-212ENST00000569575 ID3Q02535 119 aa18.45■□□□□ 0.54
RAB40C-212ENST00000569575 TNFRSF9Q07011 255 aa18.45■□□□□ 0.54
RAB40C-212ENST00000569575 UNQ5815/PRO19632Q6UWF5 114 aa18.45■□□□□ 0.54
RAB40C-212ENST00000569575 CENPVQ7Z7K6 275 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-212ENST00000569575 LFNGQ8NES3 379 aa18.45■□□□□ 0.54
RAB40C-212ENST00000569575 FYTTD1Q96QD9 318 aaKnown RBP18.45■□□□□ 0.54
RAB40C-212ENST00000569575 C13orf42A0A1B0GVH6 325 aa18.44■□□□□ 0.54
RAB40C-212ENST00000569575 TEX22C9J3V5 150 aa18.44■□□□□ 0.54
RAB40C-212ENST00000569575 CRYGCP07315 174 aa18.44■□□□□ 0.54
RAB40C-212ENST00000569575 PPIFP30405 207 aaKnown RBP18.44■□□□□ 0.54
RAB40C-212ENST00000569575 KRTAP24-1Q3LI83 254 aa18.44■□□□□ 0.54
RAB40C-212ENST00000569575 TEX38Q6PEX7 206 aa18.44■□□□□ 0.54
RAB40C-212ENST00000569575 Q6ZNX1 250 aa18.44■□□□□ 0.54
RAB40C-212ENST00000569575 ZBTB8BQ8NAP8 495 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-212ENST00000569575 CIB3Q96Q77 187 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-212ENST00000569575 PSMB11A5LHX3 300 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 IGHG4P01861 327 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 ELANEP08246 267 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 NKX2-1P43699 371 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-212ENST00000569575 PROK1P58294 105 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 RRAS2P62070 204 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-212ENST00000569575 CFHR3Q02985 330 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 KLK9Q2XQG4 91 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 NOXA1Q86UR1 476 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 OR4D5Q8NGN0 318 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 FAM110DQ8TAY7 271 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-212ENST00000569575 OR10C1Q96KK4 312 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 NMES1Q9C002 83 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 HIPK2Q9H2X6 1198 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 SLA2Q9H6Q3 261 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 KLK9Q9UKQ9 250 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 FBXO7Q9Y3I1 522 aa18.43■□□□□ 0.54
RAB40C-212ENST00000569575 IGLC7A0M8Q6 106 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 CGB1A6NKQ9 187 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 FAM25EA8MYX2 175 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 E7EUB6 86 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 SUB1P53999 127 aaKnown RBP eCLIP18.42■□□□□ 0.54
RAB40C-212ENST00000569575 SRSF4Q08170 494 aaKnown RBP18.42■□□□□ 0.54
RAB40C-212ENST00000569575 C10orf55Q5SWW7 151 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 WFDC12Q8WWY7 111 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 FAM103A1Q9BTL3 118 aaKnown RBP18.42■□□□□ 0.54
RAB40C-212ENST00000569575 HINT2Q9BX68 163 aa18.42■□□□□ 0.54
RAB40C-212ENST00000569575 NF1P21359 2839 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 TET2Q6N021 2002 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-212ENST00000569575 GOSR2O14653 212 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 IGLV1-40P01703 118 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 OPN1MWP04001 364 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 OPN1MW2P0DN77 364 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 OPN1MW3P0DN78 364 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 HIST1H1BP16401 226 aaKnown RBP18.41■□□□□ 0.54
RAB40C-212ENST00000569575 PSMB6P28072 239 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 SRSF2Q01130 221 aaKnown RBP18.41■□□□□ 0.54
RAB40C-212ENST00000569575 FOXE3Q13461 319 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 ECSCRQ19T08 205 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 OR2C3Q8N628 320 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 RNF152Q8N8N0 203 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 ZNF114Q8NC26 417 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 WIPF2Q8TF74 440 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-212ENST00000569575 NOL4LQ96MY1 436 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-212ENST00000569575 C19orf24Q9BVV8 132 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 MGAT4CQ9UBM8 478 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 WSB1Q9Y6I7 421 aa18.41■□□□□ 0.54
RAB40C-212ENST00000569575 A0A1B0GW64 132 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 CEBPZOSA8MTT3 80 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 MPTX1A8MV57 137 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 SYNGR2O43760 224 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 OR13C7P0DN81 318 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 CTRB1P17538 263 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 MDKP21741 143 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-212ENST00000569575 HOXA1P49639 335 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-212ENST00000569575 RPP30P78346 268 aaKnown RBP18.4■□□□□ 0.54
RAB40C-212ENST00000569575 IL15RAQ13261 267 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 KRTAP21-3Q3LHN1 58 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 ASPHD1Q5U4P2 390 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 CTRB2Q6GPI1 263 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 KLHDC1Q8N7A1 406 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 OR4X2Q8NGF9 303 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 GSKIPQ9P0R6 139 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 U3KQ87 197 aa18.4■□□□□ 0.54
RAB40C-212ENST00000569575 G3V318 75 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 WRBO00258 174 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 SNCAP37840 140 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 HTR2BP41595 481 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 TMEM95Q3KNT9 176 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 RAB40CQ96S21 281 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 HEYLQ9NQ87 328 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-212ENST00000569575 THYN1Q9P016 225 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 ATRQ13535 2644 aa18.39■□□□□ 0.53
RAB40C-212ENST00000569575 ZFHX3Q15911 3703 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 HMX3A6NHT5 357 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 CCSO14618 274 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 FBXO24O75426 580 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 MYOD1P15172 320 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 TAS2R30P59541 319 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 WT1-ASQ06250 92 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 AWAT1Q58HT5 328 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 CXorf66Q5JRM2 361 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms