RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 COMMD9Q9P000 198 aa10.74□□□□□ -0.69
COMMD4-216ENST00000567023 EXTL2Q9UBQ6 330 aa10.74□□□□□ -0.69
COMMD4-216ENST00000567023 TENM2Q9NT68 2774 aa10.74□□□□□ -0.69
COMMD4-216ENST00000567023 TMEM213A2RRL7 107 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 PGLYRP1O75594 196 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-216ENST00000567023 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 REG1AP05451 166 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 CLEC3BP05452 202 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 CD7P09564 240 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 EDN2P20800 178 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 F2RP25116 425 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 TAS2R46P59540 309 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 AADACL3Q5VUY0 350 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 THOC7Q6I9Y2 204 aaKnown RBP10.73□□□□□ -0.69
COMMD4-216ENST00000567023 HSD17B13Q7Z5P4 300 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-216ENST00000567023 TMEM17Q86X19 198 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 OR51H1Q8NH63 302 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 ABHD1Q96SE0 405 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 ZNF2Q9BSG1 426 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-216ENST00000567023 NXF2Q9GZY0 626 aaKnown RBP10.73□□□□□ -0.69
COMMD4-216ENST00000567023 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 THYN1Q9P016 225 aa10.73□□□□□ -0.69
COMMD4-216ENST00000567023 MFSD2BA6NFX1 497 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 ZNF701M0R085 212 aaPredicted RBP10.72□□□□□ -0.69
COMMD4-216ENST00000567023 S1PR2O95136 353 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 IFNA6P05013 189 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 PTBP1P26599 531 aaKnown RBP eCLIP10.72□□□□□ -0.69
COMMD4-216ENST00000567023 RCVRNP35243 200 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 C15orf40Q8WUR7 153 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
COMMD4-216ENST00000567023 HIPK2Q9H2X6 1198 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 PLEKHA3Q9HB20 300 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 PALMDQ9NP74 551 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 S4R3C0 116 aa10.72□□□□□ -0.69
COMMD4-216ENST00000567023 RBMY1BA6NDE4 496 aaKnown RBP10.71□□□□□ -0.69
COMMD4-216ENST00000567023 RBMY1EA6NEQ0 496 aaKnown RBP10.71□□□□□ -0.69
COMMD4-216ENST00000567023 RGS5O15539 181 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 PMP2P02689 132 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 SERPINE2P07093 398 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 RBMY1DP0C7P1 496 aaKnown RBP10.71□□□□□ -0.69
COMMD4-216ENST00000567023 C8orf88P0DMB2 117 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 HLA-DMAP28067 261 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 HRH1P35367 487 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 CMTM1Q8IZ96 169 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 OR10W1Q8NGF6 305 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 OR5H2Q8NGV7 314 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 OR6F1Q8NGZ6 308 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 ZNF502Q8TBZ5 544 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 VN1R17PQ8TDU5 208 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 FCAMRQ8WWV6 532 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 DGCR14Q96DF8 476 aaKnown RBP10.71□□□□□ -0.69
COMMD4-216ENST00000567023 NDUFA4L2Q9NRX3 87 aa10.71□□□□□ -0.69
COMMD4-216ENST00000567023 DNAH1Q9P2D7 4330 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 TEX50A0A1B0GTY4 177 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 ZNF320A2RRD8 509 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 CYB5BO43169 146 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 RLN1P04808 185 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 TRAPPC2P0DI81 140 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 TRAPPC2BP0DI82 140 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
COMMD4-216ENST00000567023 WT1-ASQ06250 92 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 GUCA2BQ16661 112 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 ZNF585BQ52M93 769 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 ZNF57Q68EA5 555 aaPredicted RBP10.7□□□□□ -0.7
COMMD4-216ENST00000567023 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 TMEM61Q8N0U2 210 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 DEFB125Q8N687 156 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 GDPD1Q8N9F7 314 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 UXS1Q8NBZ7 420 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 OR52I2Q8NH67 350 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 CACNG8Q8WXS5 425 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 MARC2Q969Z3 335 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 WDR89Q96FK6 387 aaPredicted RBP10.7□□□□□ -0.7
COMMD4-216ENST00000567023 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
COMMD4-216ENST00000567023 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
COMMD4-216ENST00000567023 KLK11Q9UBX7 282 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 MTFP1Q9UDX5 166 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 MLXQ9UH92 298 aa10.7□□□□□ -0.7
COMMD4-216ENST00000567023 RSL24D1Q9UHA3 163 aaKnown RBP10.7□□□□□ -0.7
COMMD4-216ENST00000567023 GABARAPH6UMI1 98 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 GPR31O00270 319 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 KRASP01116 189 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 GPR183P32249 361 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 ERVK-16P61578 105 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 MRPS10P82664 201 aaKnown RBP10.69□□□□□ -0.7
COMMD4-216ENST00000567023 SOSTQ9BQB4 213 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 C6orf62Q9GZU0 229 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-216ENST00000567023 MRPL27Q9P0M9 148 aaKnown RBP10.69□□□□□ -0.7
COMMD4-216ENST00000567023 RABL2AQ9UBK7 228 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-216ENST00000567023 RABL2BQ9UNT1 228 aa10.69□□□□□ -0.7
COMMD4-216ENST00000567023 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
COMMD4-216ENST00000567023 CCDC160A6NGH7 325 aa10.68□□□□□ -0.7
COMMD4-216ENST00000567023 CTDSPLO15194 276 aa10.68□□□□□ -0.7
COMMD4-216ENST00000567023 OR13C7P0DN81 318 aa10.68□□□□□ -0.7
COMMD4-216ENST00000567023 TBPP20226 339 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms