RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ZNF826PQ6ZT77 177 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 GCNT2Q8N0V5 402 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 TMEM251Q8N6I4 163 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 KLHDC1Q8N7A1 406 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 OR4P4Q8NGL7 312 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 PPIAL4AQ9Y536 164 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 TRAV3A0A0B4J244 114 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 ISLRO14498 428 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 SPINT2O43291 252 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 PMCHP20382 165 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 RFESDQ8TAC1 157 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 TXN2Q99757 166 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 TMEM167BQ9NRX6 74 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 IL19Q9UHD0 177 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
COMMD4-215ENST00000566843 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-215ENST00000566843 WDFY3Q8IZQ1 3526 aa12.93□□□□□ -0.34
COMMD4-215ENST00000566843 SMIM27A0A1W2PRY6 76 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 DPRXA6NFQ7 191 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 FNDC10F2Z333 226 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 LINC00869P0C866 280 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 DUSP3P51452 185 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-215ENST00000566843 ERVK-16P61578 105 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 C3AR1Q16581 482 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 KIAA1644Q3SXP7 199 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 PQLC2Q6ZP29 291 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 ZPBPQ9BS86 351 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 C20orf202A1L168 122 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 CDX4O14627 284 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-215ENST00000566843 TOMM40O96008 361 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 TFF1P04155 84 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 SRIP30626 198 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 RAB31Q13636 194 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 MIR17HGQ75NE6 70 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 FAM90A1Q86YD7 464 aa12.92□□□□□ -0.34
COMMD4-215ENST00000566843 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
COMMD4-215ENST00000566843 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-215ENST00000566843 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 CCL25O15444 150 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 CA2P00918 260 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 IGLV2-8P01709 118 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 CRYBB3P26998 211 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-215ENST00000566843 TIPARPQ7Z3E1 657 aaKnown RBP12.91□□□□□ -0.34
COMMD4-215ENST00000566843 VASH2Q86V25 355 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 DOLPP1Q86YN1 238 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 TPRX1Q8N7U7 411 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 RNASE7Q9H1E1 156 aaKnown RBP12.91□□□□□ -0.34
COMMD4-215ENST00000566843 CXXC4Q9H2H0 198 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 TMEM140Q9NV12 185 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 CDC42EP3Q9UKI2 254 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 COL8A2P25067 703 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 MPV17P39210 176 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 HOXA4Q00056 320 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-215ENST00000566843 TCF15Q12870 199 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 TIGITQ495A1 244 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 C6orf15Q6UXA7 325 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-215ENST00000566843 WDR82Q6UXN9 313 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 ZNF439Q8NDP4 499 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 NEUROG1Q92886 237 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 OBP2BQ9NPH6 170 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 DOCK7Q96N67 2140 aa12.91□□□□□ -0.34
COMMD4-215ENST00000566843 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 M0R1X1 148 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 SPINK4O60575 86 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 NPY1RP25929 384 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 KIR2DS2P43631 304 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 MORN2Q502X0 79 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 CXorf67Q86X51 503 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-215ENST00000566843 VKORC1L1Q8N0U8 176 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 OR5B3Q8NH48 314 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 CORO2AQ92828 525 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 DCTN5Q9BTE1 182 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 JPT1Q9UK76 154 aa12.9□□□□□ -0.34
COMMD4-215ENST00000566843 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 C15orf61A6NNL5 157 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 ZNF883P0CG24 379 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 IGFBP2P18065 325 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 TSPOP30536 169 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 PMCHL1Q16048 86 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 ABHD17BQ5VST6 288 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 PRSS33Q8NF86 280 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 SLC24A4Q8NFF2 622 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 KLF14Q8TD94 323 aaPredicted RBP12.9□□□□□ -0.35
COMMD4-215ENST00000566843 ZNF503Q96F45 646 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 IGF2BP2-AS1Q96M15 143 aa12.9□□□□□ -0.35
COMMD4-215ENST00000566843 APCSP02743 223 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 SELENOVP59797 346 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 RBX1P62877 108 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 FXYD3Q14802 87 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 PSG5Q15238 335 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 FAM214BQ7L5A3 538 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-215ENST00000566843 DDB2Q92466 427 aa12.89□□□□□ -0.35
COMMD4-215ENST00000566843 IGHV2-26A0A0B4J1V2 119 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 K7EP13 123 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms