RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 LOC100506127A0A0U1RQW1 187 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 TEX50A0A1B0GTY4 177 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 TGOLN2O43493 480 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 SERPINE2P07093 398 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 HERV-K104P61576 105 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 ERVK-16P61578 105 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 AADACL3Q5VUY0 350 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 SPSB3Q6PJ21 355 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 GDPD1Q8N9F7 314 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 OR51H1Q8NH63 302 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 S100A16Q96FQ6 103 aaKnown RBP11.19□□□□□ -0.62
RNF40-209ENST00000566703 SPAG8Q99932 426 aaPredicted RBP11.19□□□□□ -0.62
RNF40-209ENST00000566703 RNF167Q9H6Y7 350 aa11.19□□□□□ -0.62
RNF40-209ENST00000566703 K7EMT4 169 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 UBE2CO00762 179 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 TSPAN4O14817 238 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 S1PR2O95136 353 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 ATP6V1G2O95670 118 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 OR13C7P0DN81 318 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 F2RP25116 425 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 LAMTOR1Q6IAA8 161 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 SLC25A24Q6NUK1 477 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 Q6ZWC4 215 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 BSCL2Q96G97 398 aaPredicted RBP11.18□□□□□ -0.62
RNF40-209ENST00000566703 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 ANAPC10Q9UM13 185 aa11.18□□□□□ -0.62
RNF40-209ENST00000566703 PGLYRP1O75594 196 aaPredicted RBP11.17□□□□□ -0.62
RNF40-209ENST00000566703 SNAPC5O75971 98 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 APOC4P55056 127 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 TMEM17Q86X19 198 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 MOB3AQ96BX8 217 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 IFT46Q9NQC8 304 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
RNF40-209ENST00000566703 FKBP11Q9NYL4 201 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 EHFQ9NZC4 300 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
RNF40-209ENST00000566703 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
RNF40-209ENST00000566703 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 MARCH11A6NNE9 402 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 NDUFA4O00483 81 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 FCER2P06734 321 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 NAT1P18440 290 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
RNF40-209ENST00000566703 CMTM1Q8IZ96 169 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 KIR2DL5BQ8NHK3 375 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 LSM10Q969L4 123 aaKnown RBP11.16□□□□□ -0.62
RNF40-209ENST00000566703 DGCR14Q96DF8 476 aaKnown RBP11.16□□□□□ -0.62
RNF40-209ENST00000566703 C21orf62Q9NYP8 219 aa11.16□□□□□ -0.62
RNF40-209ENST00000566703 BMI1P35226 326 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 LPAR6P43657 344 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 RFX2P48378 723 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 TAS2R46P59540 309 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 OR6F1Q8NGZ6 308 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 OR5B3Q8NH48 314 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 FCAMRQ8WWV6 532 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 TMEM56Q96MV1 263 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 ZNF2Q9BSG1 426 aaPredicted RBP11.15□□□□□ -0.62
RNF40-209ENST00000566703 FAM212BQ9NTI7 297 aaPredicted RBP11.15□□□□□ -0.62
RNF40-209ENST00000566703 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
RNF40-209ENST00000566703 MEIS3P1A6NDR6 274 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 OR2T8A6NH00 312 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 GPR31O00270 319 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 SPRY2O43597 315 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 KRASP01116 189 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 MFAP2P55001 183 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 CMC4P56277 68 aaPredicted RBP11.14□□□□□ -0.63
RNF40-209ENST00000566703 KCTD21Q4G0X4 260 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 UBE2NLQ5JXB2 153 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 LPCAT3Q6P1A2 487 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 OR5H2Q8NGV7 314 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 TSC22D3Q99576 134 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 STARD9Q9P2P6 4700 aa11.14□□□□□ -0.63
RNF40-209ENST00000566703 DNAH1Q9P2D7 4330 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 NUPR2A6NF83 97 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 K7EIM0 57 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 RLN1P04808 185 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 RPA2P15927 270 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 PRSS3P35030 304 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 TAS2R20P59543 309 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 NEDD8Q15843 81 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 TMEM69Q5SWH9 247 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 TSPAN14Q8NG11 270 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 CHRDL1Q9BU40 450 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 HINT2Q9BX68 163 aa11.13□□□□□ -0.63
RNF40-209ENST00000566703 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
RNF40-209ENST00000566703 PMP2P02689 132 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms