RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HRH1P35367 487 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 SLC16A13Q7RTY0 426 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 OR10W1Q8NGF6 305 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 VN1R17PQ8TDU5 208 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 CACNG8Q8WXS5 425 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 MARC2Q969Z3 335 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 WDR89Q96FK6 387 aaPredicted RBP15.19■□□□□ 0.02
CLN6-207ENST00000566347 FXYD6Q9H0Q3 95 aa15.19■□□□□ 0.02
CLN6-207ENST00000566347 DYNC2H1Q8NCM8 4307 aaKnown RBP15.19■□□□□ 0.02
CLN6-207ENST00000566347 TEX50A0A1B0GTY4 177 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 SNAPC5O75971 98 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 EIF4EP06730 217 aaKnown RBP15.18■□□□□ 0.02
CLN6-207ENST00000566347 SERPINE2P07093 398 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 OR13C7P0DN81 318 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 HLA-DMAP28067 261 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 S100GP29377 79 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 GPR183P32249 361 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 LPAR6P43657 344 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 LPCAT3Q6P1A2 487 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 PLET1Q6UQ28 207 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 LYSMD2Q8IV50 215 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 DEFB125Q8N687 156 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 UXS1Q8NBZ7 420 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 GPX8Q8TED1 209 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 FCAMRQ8WWV6 532 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 SRD5A3Q9H8P0 318 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 SCPEP1Q9HB40 452 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 COMMD3Q9UBI1 195 aa15.18■□□□□ 0.02
CLN6-207ENST00000566347 KRASP01116 189 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 ELLP55199 621 aaPredicted RBP15.17■□□□□ 0.02
CLN6-207ENST00000566347 TSPAN5P62079 268 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 ZFAND6Q6FIF0 208 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 TMEM61Q8N0U2 210 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 LSM10Q969L4 123 aaKnown RBP15.17■□□□□ 0.02
CLN6-207ENST00000566347 FUNDC2Q9BWH2 189 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 HIPK2Q9H2X6 1198 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 NDUFA4L2Q9NRX3 87 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 MLXQ9UH92 298 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 UFC1Q9Y3C8 167 aa15.17■□□□□ 0.02
CLN6-207ENST00000566347 G6PCP35575 357 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 NCS1P62166 190 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 WT1-ASQ06250 92 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 ANKRD55Q3KP44 614 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 ZNF585BQ52M93 769 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 SLC25A24Q6NUK1 477 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 HINT2Q9BX68 163 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 FAM212BQ9NTI7 297 aaPredicted RBP15.16■□□□□ 0.02
CLN6-207ENST00000566347 FKBP11Q9NYL4 201 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 MRPL27Q9P0M9 148 aaKnown RBP15.16■□□□□ 0.02
CLN6-207ENST00000566347 PRNDQ9UKY0 176 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 OR51B2Q9Y5P1 312 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 TENM2Q9NT68 2774 aa15.16■□□□□ 0.02
CLN6-207ENST00000566347 TRAV25A0A0B4J276 109 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 RBMY1BA6NDE4 496 aaKnown RBP15.15■□□□□ 0.02
CLN6-207ENST00000566347 RBMY1EA6NEQ0 496 aaKnown RBP15.15■□□□□ 0.02
CLN6-207ENST00000566347 TGOLN2O43493 480 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 RBMY1DP0C7P1 496 aaKnown RBP15.15■□□□□ 0.02
CLN6-207ENST00000566347 C8orf88P0DMB2 117 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 RCVRNP35243 200 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 VBP1P61758 197 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 TM4SF20Q53R12 229 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 BTNL8Q6UX41 500 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 UNQ9165/PRO28630Q6UXU0 137 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 OR52B4Q8NGK2 314 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 OR1L6Q8NGR2 347 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 OR5B3Q8NH48 314 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 ATP6V0BQ99437 205 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 TSC22D3Q99576 134 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 ZNF436Q9C0F3 470 aaPredicted RBP15.15■□□□□ 0.02
CLN6-207ENST00000566347 WFDC10AQ9H1F0 79 aa15.15■□□□□ 0.02
CLN6-207ENST00000566347 F11RQ9Y624 299 aaKnown RBP15.15■□□□□ 0.02
CLN6-207ENST00000566347 PHLDA2Q53GA4 152 aa15.14■□□□□ 0.01
CLN6-207ENST00000566347 SNX29P2Q8IUI4 249 aa15.14■□□□□ 0.01
CLN6-207ENST00000566347 BSCL2Q96G97 398 aaPredicted RBP15.14■□□□□ 0.01
CLN6-207ENST00000566347 TMEM56Q96MV1 263 aa15.14■□□□□ 0.01
CLN6-207ENST00000566347 RETNQ9HD89 108 aa15.14■□□□□ 0.01
CLN6-207ENST00000566347 NSG2Q9Y328 171 aa15.14■□□□□ 0.01
CLN6-207ENST00000566347 CSMD3Q7Z407 3707 aa15.13■□□□□ 0.01
CLN6-207ENST00000566347 SCAF4O95104 1147 aaKnown RBP15.13■□□□□ 0.01
CLN6-207ENST00000566347 RORCP51449 518 aa15.13■□□□□ 0.01
CLN6-207ENST00000566347 SPSB3Q6PJ21 355 aa15.13■□□□□ 0.01
CLN6-207ENST00000566347 RBPMS2Q6ZRY4 209 aaKnown RBP15.13■□□□□ 0.01
CLN6-207ENST00000566347 SLC38A6Q8IZM9 456 aa15.13■□□□□ 0.01
CLN6-207ENST00000566347 TMEM190Q8WZ59 177 aa15.13■□□□□ 0.01
CLN6-207ENST00000566347 SELENOKQ9Y6D0 94 aa15.13■□□□□ 0.01
CLN6-207ENST00000566347 IGHV3-35A0A0C4DH35 117 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 LCE6AA0A183 80 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 OR2T8A6NH00 312 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 C15orf61A6NNL5 157 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 ELK1P19419 428 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 UCP3P55916 312 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 TBC1D26Q86UD7 250 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 IL17DQ8TAD2 202 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 TMEM14BQ9NUH8 114 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 C21orf62Q9NYP8 219 aa15.12■□□□□ 0.01
CLN6-207ENST00000566347 HPGDSO60760 199 aa15.11■□□□□ 0.01
CLN6-207ENST00000566347 MFAP2P55001 183 aa15.11■□□□□ 0.01
CLN6-207ENST00000566347 MZT2AQ6P582 158 aa15.11■□□□□ 0.01
CLN6-207ENST00000566347 SCARB1Q8WTV0 552 aa15.11■□□□□ 0.01
CLN6-207ENST00000566347 AP3S1Q92572 193 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms