RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BOP23527 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BBP33778 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BDP58876 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BCP62807 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST2H2BEQ16778 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 CXorf66Q5JRM2 361 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BHQ93079 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BNQ99877 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BMQ99879 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 ABCA7Q8IZY2 2146 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 IGHV1OR21-1A0A087WYE8 117 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 SERF1AO75920 110 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 C1QTNF9P0C862 333 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 FUT5Q11128 374 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 JPT1Q9UK76 154 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 TNFRSF6BO95407 300 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 COQ2Q96H96 371 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 MRPL20Q9BYC9 149 aaKnown RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 CCL27Q9Y4X3 112 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 PGLYRP1O75594 196 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 IGKCP01834 107 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 SRP19P09132 144 aaKnown RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 SOX8P57073 446 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 PRSS53Q2L4Q9 553 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 RSPO3Q9BXY4 272 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 NPCDR1Q9BY65 106 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 EDA2RQ9HAV5 297 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 VWC2LB2RUY7 222 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 FOXA3P55318 350 aaPredicted RBP4.35□□□□□ -1.71
SMG1-211ENST00000565324 C1orf185Q5T7R7 199 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 VN1R4Q7Z5H5 301 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 OR11H4Q8NGC9 324 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 DLL3Q9NYJ7 618 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 METTL12A8MUP2 240 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 LTBP4Q8N2S1 1624 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGKV3D-15A0A087WSY6 115 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGHV3-21A0A0B4J1V1 117 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TM4SF5O14894 197 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGKV3-15P01624 115 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 RIPPLY3P57055 190 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 FAM19A2Q8N3H0 131 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 GTF3C1Q12789 2109 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TRBV20-1A0A075B6N2 111 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TRBV5-7A0A0A0MS05 114 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 NDUFA3O95167 84 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 ARPC1AQ92747 370 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 Q96M66 194 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 R4GN57 208 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGKV3D-11A0A0A0MRZ8 115 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 PSMB11A5LHX3 300 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGKV3-11P04433 115 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 ZNF708P17019 499 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 C9orf153Q5TBE3 101 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 SPINK14Q6IE38 97 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 OSR1Q8TAX0 266 aaPredicted RBP4.35□□□□□ -1.71
SMG1-211ENST00000565324 ARRDC1-AS1Q9H2J1 176 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGHV3OR15-7A0A075B7D8 119 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TMEM8BA6NDV4 472 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 NANOS3P60323 173 aaKnown RBP4.35□□□□□ -1.71
SMG1-211ENST00000565324 LINC01465Q8N7H1 131 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 CST9LQ9H4G1 147 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 PLSCR4Q9NRQ2 329 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 IGHV1-69-2A0A0G2JMI3 117 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 ZG16O60844 167 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TDGF1P13385 188 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 MYOD1P15172 320 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 DLK2Q6UY11 383 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 PLXND1Q9Y4D7 1925 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TRAV24A0A0B4J272 114 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 NPIPB11E5RHQ5 1161 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 OR2H2O95918 312 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 RPRMQ9NS64 109 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 ARFGEF3Q5TH69 2177 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 SSBP3Q9BWW4 388 aaPredicted RBP4.35□□□□□ -1.71
SMG1-211ENST00000565324 IDI2-AS1Q9NZ38 188 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 PRR33A8MZF0 331 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TMEM229AB2RXF0 380 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TOMM40O96008 361 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 SP9P0CG40 484 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 COX5BP10606 129 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TMEM187Q14656 261 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 SLC25A53Q5H9E4 307 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 ZNF818PQ6ZRF7 136 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 SBF1O95248 1867 aa4.35□□□□□ -1.71
SMG1-211ENST00000565324 TMEM42Q69YG0 159 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 ABHD17AQ96GS6 310 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 CITED1Q99966 193 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 TNFSF13O75888 250 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 ICAM4Q14773 271 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 PEX11BO96011 259 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 MAGEA5P43359 124 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 CCL20P78556 96 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 TICRRQ7Z2Z1 1910 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 IGHV3OR16-12A0A075B7B8 117 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 FAM90A9PA6NNJ1 464 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 M0R381 172 aa4.34□□□□□ -1.71
SMG1-211ENST00000565324 MOSP00540 346 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms