RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	FAM219A	Q8IW50	185 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	ZNF561	Q8N587	486 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	ZFP62	Q8NB50	900 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	OR10V1	Q8NGI7	309 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	OR4D5	Q8NGN0	318 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	OR1K1	Q8NGR3	316 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	OR1J1	Q8NGS3	322 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	OR2G3	Q8NGZ4	309 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	CD300LF	Q8TDQ1	290 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	LSM10	Q969L4	123 aa	Known RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	MRPL24	Q96A35	216 aa	Known RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	POM121L2	Q96KW2	1035 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	CIB3	Q96Q77	187 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	ATP5S	Q99766	215 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	NRIP2	Q9BQI9	281 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	TCEAL7	Q9BRU2	100 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	HDHD3	Q9BSH5	251 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	ARV1	Q9H2C2	271 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	SLC7A10	Q9NS82	523 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	LYRM2	Q9NU23	88 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	TRAPPC2L	Q9UL33	140 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	LIPG	Q9Y5X9	500 aa		3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	HEATR1	Q9H583	2144 aa	Known RBP	3.58	□□□□□ -1.84
BBS4-208	ENST00000565160	IGKV1-27	A0A075B6S5	117 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	IGKV1-12	A0A0C4DH73	117 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	TMEM30CP	A0ZSE6	113 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160		B4DEV8	164 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	DNASE2	O00115	360 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	HSD17B6	O14756	317 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	TGOLN2	O43493	480 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SSSCA1	O60232	199 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SS18L1	O75177	396 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	PGLYRP1	O75594	196 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	NXPH2	O95156	264 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	NAPSA	O96009	420 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	IGKV1D-12	P01611	117 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	IGHV3-9	P01782	118 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	MT-ND4L	P03901	98 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	CD5	P06127	495 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	WNT2	P09544	360 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	OR8U8	P0C7N1	319 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	MUC1	P15941	1255 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	F2R	P25116	425 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	UCP1	P25874	307 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	CD80	P33681	288 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SNCA	P37840	140 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	LPAR6	P43657	344 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SULT1A1	P50225	295 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	PPT1	P50897	306 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GAGE2B	Q13066	116 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	CLINT1	Q14677	625 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GUK1	Q16774	197 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	ATP6V1F	Q16864	119 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SP6	Q3SY56	376 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	RNF212	Q495C1	297 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GAGE2E	Q4V326	116 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	KPRP	Q5T749	579 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	C9orf135	Q5VTT2	229 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GAGE2A	Q6NT46	116 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	RBMS3	Q6XE24	437 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SELENOH	Q8IZQ5	122 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GAPT	Q8N292	157 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	C17orf78	Q8N4C9	275 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SLC35G3	Q8N808	338 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	OR10Z1	Q8NGY1	313 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	LYPD6B	Q8NI32	183 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	FAM213B	Q8TBF2	198 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GLYATL2	Q8WU03	294 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	BCL2L2	Q92843	193 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	PINX1	Q96BK5	328 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	NIPSNAP3B	Q9BS92	247 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	CABLES2	Q9BTV7	478 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	C1QTNF6	Q9BXI9	259 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	SMIM3	Q9BZL3	60 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	BCL2L14	Q9BZR8	327 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	OR51I2	Q9H344	312 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	TUBA4B	Q9H853	241 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	ZDHHC11	Q9H8X9	412 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	RPS10P5	Q9NQ39	176 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	DEPP	Q9NTK1	212 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	TAAR3P	Q9P1P4	343 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	GAGE2D	Q9UEU5	116 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	FBXO7	Q9Y3I1	522 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	WSB1	Q9Y6I7	421 aa		3.57	□□□□□ -1.84
BBS4-208	ENST00000565160	ARHGAP32	A7KAX9	2087 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	IGKV1D-8	A0A087WSZ0	117 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160		A0A1W2PPI3	338 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	C5orf63	A6NC05	138 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	PINLYP	A6NC86	204 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	RBFOX3	A6NFN3	312 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	OOEP	A6NGQ2	149 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	MSGN1	A6NI15	193 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160		A8MXE2	369 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	C17orf112	F2Z3M2	114 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	AGPAT2	O15120	278 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	NUPL2	O15504	423 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	CHST1	O43916	411 aa		3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	TIMM8A	O60220	97 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-208	ENST00000565160	IGHG3	P01860	377 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms