RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 MDP1Q86V88 176 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 ZNF584Q8IVC4 421 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 OR2M3Q8NG83 312 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 FNDC9Q8TBE3 224 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 MRPL30Q8TCC3 161 aaKnown RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 PP6455Q8WZ26 134 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 ABHD14BQ96IU4 210 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 C18orf15Q96N68 181 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 ERMAPQ96PL5 475 aaPredicted RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 SMIM14Q96QK8 99 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 GPX7Q96SL4 187 aaPredicted RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 OPRPNQ99935 248 aaPredicted RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 SNHG12Q9BXW3 62 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 LHX9Q9NQ69 397 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 NAT8Q9UHE5 227 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 SCP2D1Q9UJQ7 156 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 BOKQ9UMX3 212 aaPredicted RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 TROQ12816 1431 aaPredicted RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 SPATA31E1Q6ZUB1 1445 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 MAGI1Q96QZ7 1491 aaPredicted RBP3.33□□□□□ -1.88
CHD9-214ENST00000565119 ARHGAP35Q9NRY4 1499 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 MBD5Q9P267 1494 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 AKAP12Q02952 1782 aa3.33□□□□□ -1.88
CHD9-214ENST00000565119 LOC100130705A0A1B0GUX0 176 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 TMEM72A0PK05 275 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 LINC00862A6NCI5 91 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 KRBOX1C9JBD0 128 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 H0YJW9 148 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 LTAP01374 205 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 ZNF728P0DKX0 622 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 NTF3P20783 257 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 ATP6V0CP27449 155 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 CA7P43166 264 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 RAB5CP51148 216 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 NDUFA6P56556 154 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 HSD17B12Q53GQ0 312 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 COL5A1-AS1Q5SY13 56 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 MRPL2Q5T653 305 aaKnown RBP3.32□□□□□ -1.88
CHD9-214ENST00000565119 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 EBLN2Q6P2I7 272 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 DNAJC24Q6P3W2 148 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 C1orf174Q8IYL3 243 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 C4orf33Q8N1A6 199 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.32□□□□□ -1.88
CHD9-214ENST00000565119 SGMS2Q8NHU3 365 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 TMEM190Q8WZ59 177 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 TOMM6Q96B49 74 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 WDR61Q9GZS3 305 aaKnown RBP3.32□□□□□ -1.88
CHD9-214ENST00000565119 C11orf68Q9H3H3 251 aaKnown RBP3.32□□□□□ -1.88
CHD9-214ENST00000565119 PCTPQ9UKL6 214 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 ANKRD36BQ8N2N9 1353 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 ZFYVE16Q7Z3T8 1539 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 UBR2Q8IWV8 1755 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 WNK3Q9BYP7 1800 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 SBF1O95248 1867 aa3.32□□□□□ -1.88
CHD9-214ENST00000565119 PRRC2AP48634 2157 aaKnown RBP3.31□□□□□ -1.88
CHD9-214ENST00000565119 CDK5RAP2Q96SN8 1893 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 HECW1Q76N89 1606 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 NAIPQ13075 1403 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 TRAV9-1A0A075B6T8 112 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 IGHV3-74A0A0B4J1X5 117 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 IGHV3-35A0A0C4DH35 117 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 TRBV7-6A0A0J9YX20 115 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 DPRXA6NFQ7 191 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 TLCD2A6NGC4 264 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 GGT3PA6NGU5 568 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 B4DEV8 164 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 C9JQL5 133 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 COX7A2LO14548 114 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 NPFFO15130 113 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 HLA-DPB1P04440 258 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 PAEPP09466 180 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 RBMXP38159 391 aaKnown RBP3.31□□□□□ -1.88
CHD9-214ENST00000565119 GABARAPL2P60520 117 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 ZNF141Q15928 474 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 MARCH3Q86UD3 253 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 SNX29P2Q8IUI4 249 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 MSRB3Q8IXL7 192 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 OR51A4Q8NGJ6 313 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 OR1J4Q8NGS1 313 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 BORCS8Q96FH0 119 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 OTORQ9NRC9 128 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 AGRNO00468 2067 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 TRIP11Q15643 1979 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 AKAP11Q9UKA4 1901 aa3.31□□□□□ -1.88
CHD9-214ENST00000565119 KIAA1551Q9HCM1 1747 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 CCDC18Q5T9S5 1454 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 TRBV20OR9-2A0A075B6H5 130 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 IGKV6D-21A0A0A0MT36 114 aa3.3□□□□□ -1.88
CHD9-214ENST00000565119 LOC107984640A0A0U1RRK4 108 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms