RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 IGHV3-23P01764 117 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 GP9P14770 177 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 MAS1LP35410 378 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 FAUP35544 74 aaKnown RBP10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 ATP5G2Q06055 141 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 BAK1Q16611 211 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 RPEL1Q2QD12 228 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 ZNF343Q6P1L6 599 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 CCDC71LQ8N9Z2 235 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 RTBDNQ9BSG5 229 aaPredicted RBP10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 C5orf66Q9H5L9 145 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 MCUBQ9NWR8 336 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 GPR132Q9UNW8 380 aa10.44□□□□□ -0.74
VPS9D1-204ENST00000565023 DNAH9Q9NYC9 4486 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 MARCH11A6NNE9 402 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 H0Y980 276 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 UPK2O00526 184 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 FGF2P09038 288 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 AREGP15514 252 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 RPL8P62917 257 aaKnown RBP10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 TTC9CQ8N5M4 171 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 DMBX1Q8NFW5 382 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 TMEM140Q9NV12 185 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 COPZ2Q9P299 210 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 SMAD5-AS1Q9Y6J3 95 aa10.43□□□□□ -0.74
VPS9D1-204ENST00000565023 TENM3Q9P273 2699 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 C3orf85A0A1B0GTC6 90 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 A0A1B0GW64 132 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 FAM223BA6NKX1 122 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 PPP5D1E7EU14 171 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 BRI3O95415 125 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 KRASP01116 189 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 IGKV1-39P01597 117 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 IGKV1D-39P04432 117 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 HLA-GP17693 338 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 ERVK-16P61578 105 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 TATDN3Q17R31 274 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 C15orf32Q32M92 178 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 SLC25A42Q86VD7 318 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 FAM223AQ8IWN6 122 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 OR9G4Q8NGQ1 327 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 SCGB3A2Q96PL1 93 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 TP53RKQ96S44 253 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 PTTG2Q9NZH5 202 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 FBXL7Q9UJT9 491 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 C14orf166Q9Y224 244 aaKnown RBP10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 ZNF257Q9Y2Q1 563 aa10.42□□□□□ -0.74
VPS9D1-204ENST00000565023 B3GALNT1O75752 331 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 NDUFB8O95169 186 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 HLA-AP01891 365 aaKnown RBP10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 SERPINE2P07093 398 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 DEFA4P12838 97 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 G6PCP35575 357 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 KLF5Q13887 457 aaPredicted RBP10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 TRIQKQ629K1 86 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 ZNF57Q68EA5 555 aaPredicted RBP10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 SEC22AQ96IW7 307 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 HINT2Q9BX68 163 aa10.41□□□□□ -0.74
VPS9D1-204ENST00000565023 TRBV9A0A0B4J1U6 114 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 CGB1A6NKQ9 187 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 BMPR1BO00238 502 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 IL7P13232 177 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 UCP1P25874 307 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 PSMB6P28072 239 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 OR2B8PP59922 312 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 SP6Q3SY56 376 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 NECAP1Q8NC96 275 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 NAA60Q9H7X0 242 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 ZC4H2Q9NQZ6 224 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.74
VPS9D1-204ENST00000565023 TEX13DA0A0J9YY54 714 aaPredicted RBP10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 NAP1L6A6NFF2 107 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 NPIPB5A8MRT5 1133 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 INPP1P49441 399 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 CLEC19AQ6UXS0 136 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 OR10W1Q8NGF6 305 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 GLYATL2Q8WU03 294 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM230Q96A57 120 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 FANCD2OSQ96PS1 177 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 TSC22D3Q99576 134 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 SLC25A21Q9BQT8 299 aaPredicted RBP10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM222Q9H0R3 208 aa10.39□□□□□ -0.75
VPS9D1-204ENST00000565023 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 SNAPC5O75971 98 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 OR2C1O95371 312 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 CDS2O95674 445 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 DHFRP00374 187 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 IGKV1-5P01602 117 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 CSN3P07498 182 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 P0C879 139 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 CTRB1P17538 263 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 EDN2P20800 178 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms