RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 EFNB3Q15768 340 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 SPACA3Q8IXA5 215 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 CCL13Q99616 98 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 YTHDF2Q9Y5A9 579 aaKnown RBP12.49□□□□□ -0.41
HERC2-207ENST00000564734 FNDC10F2Z333 226 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 K7EM74 188 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 DSCAMO60469 2012 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 PRR20EP86478 221 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 PRR20CP86479 221 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 PRR20DP86480 221 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 PRR20BP86481 221 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 PRR20AP86496 221 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 TEX36Q5VZQ5 186 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 TEPPQ6URK8 271 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
HERC2-207ENST00000564734 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
HERC2-207ENST00000564734 XKRY2A2RUG3 117 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 GCHFRP30047 84 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
HERC2-207ENST00000564734 KCNIP4Q6PIL6 250 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
HERC2-207ENST00000564734 FAM216BQ8N7L0 139 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 STPG3Q8N7X2 389 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 A8MXE2 369 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 CT45A6P0DMU7 189 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 CT45A5P0DMU8 189 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 CT45A7P0DMV0 189 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 COL8A2P25067 703 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 CD40P25942 277 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 FOXL1Q12952 345 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 C9orf152Q5JTZ5 239 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 DEFB108BQ8NET1 73 aa12.48□□□□□ -0.41
HERC2-207ENST00000564734 RPUSD1Q9UJJ7 312 aaKnown RBP12.48□□□□□ -0.41
HERC2-207ENST00000564734 SCO2A0A1W2PP80 73 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 DVL1O14640 695 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 LINC00869P0C866 280 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 IL3RAP26951 378 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 GAMTQ14353 236 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 FAM78BQ5VT40 261 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 FUT9Q9Y231 359 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 DSCAML1Q8TD84 2053 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 UPK2O00526 184 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 GNG10P50151 68 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 PRSS8Q16651 343 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 NUP37Q8NFH4 326 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 OR5R1Q8NH85 324 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 PRNDQ9UKY0 176 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 ZNF257Q9Y2Q1 563 aa12.47□□□□□ -0.41
HERC2-207ENST00000564734 SRRM4A7MD48 611 aaKnown RBP12.46□□□□□ -0.41
HERC2-207ENST00000564734 FOXH1O75593 365 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 SELENOVP59797 346 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 JOSD1Q15040 202 aaPredicted RBP12.46□□□□□ -0.41
HERC2-207ENST00000564734 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.41
HERC2-207ENST00000564734 SFRP2Q96HF1 295 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 CHODLQ9H9P2 273 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 RAI1Q7Z5J4 1906 aaPredicted RBP12.46□□□□□ -0.41
HERC2-207ENST00000564734 CCKARP32238 428 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 FAM57AQ8TBR7 257 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 TMEM204Q9BSN7 226 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
HERC2-207ENST00000564734 IGFBP2P18065 325 aa12.46□□□□□ -0.42
HERC2-207ENST00000564734 RHOBP62745 196 aa12.46□□□□□ -0.42
HERC2-207ENST00000564734 PRCDQ00LT1 54 aa12.46□□□□□ -0.42
HERC2-207ENST00000564734 C11orf52Q96A22 123 aa12.46□□□□□ -0.42
HERC2-207ENST00000564734 GATCO43716 136 aaKnown RBP12.45□□□□□ -0.42
HERC2-207ENST00000564734 CRYABP02511 175 aaKnown RBP12.45□□□□□ -0.42
HERC2-207ENST00000564734 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
HERC2-207ENST00000564734 SLC45A2Q9UMX9 530 aa12.45□□□□□ -0.42
HERC2-207ENST00000564734 IGKV1-16P04430 117 aa12.45□□□□□ -0.42
HERC2-207ENST00000564734 ELOVL5Q9NYP7 299 aa12.45□□□□□ -0.42
HERC2-207ENST00000564734 ZNRD1Q9P1U0 126 aa12.45□□□□□ -0.42
HERC2-207ENST00000564734 J3QR06 171 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 GZMBP10144 247 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 TNFSF4P23510 183 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 LINC00469Q8N7U9 141 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 TEX50A0A1B0GTY4 177 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 PAX1P15863 534 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 RAB31Q13636 194 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 KRTCAP3Q53RY4 240 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 ZNF833PQ6ZTB9 187 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 SLC35D1Q9NTN3 355 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 TANC2Q9HCD6 1990 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 AREGP15514 252 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 UNQ6494/PRO21346Q6UXR6 183 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 BTF3L4Q96K17 158 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 SLC25A10Q9UBX3 287 aaPredicted RBP12.44□□□□□ -0.42
HERC2-207ENST00000564734 LINC00312Q9Y6C7 94 aa12.44□□□□□ -0.42
HERC2-207ENST00000564734 A0A0U1RQK1 487 aa12.43□□□□□ -0.42
HERC2-207ENST00000564734 ZNF320A2RRD8 509 aa12.43□□□□□ -0.42
HERC2-207ENST00000564734 FCN3O75636 299 aa12.43□□□□□ -0.42
HERC2-207ENST00000564734 PKIAP61925 76 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 1406.1 ms