RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DEFA3P59666 94 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 GNG5P63218 68 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 HBA1P69905 142 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 NOXRED1Q6NXP6 359 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 ZNF322Q6U7Q0 402 aaPredicted RBP1.61□□□□□ -2.15
UBR1-205ENST00000564540 SSX8Q7RTT4 187 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 OR10P1Q8NGE3 313 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 OR11H2Q8NH07 326 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 OR10A6Q8NH74 314 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 OR13C6PQ8NH95 151 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 CMTM2Q8TAZ6 248 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 MRPL30Q8TCC3 161 aaKnown RBP1.61□□□□□ -2.15
UBR1-205ENST00000564540 GNPDA2Q8TDQ7 276 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 RASSF5Q8WWW0 418 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 MGLLQ99685 303 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 DDA1Q9BW61 102 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 TTTY13Q9BZ97 58 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 C20orf27Q9GZN8 174 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 SMDT1Q9H4I9 107 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 BIN3Q9NQY0 253 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 TP73-AS1Q9UF72 201 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 PRNDQ9UKY0 176 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 PTPRJQ12913 1337 aa1.61□□□□□ -2.15
UBR1-205ENST00000564540 DOCK5Q9H7D0 1870 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 COL5A3P25940 1745 aaPredicted RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 DICER1Q9UPY3 1922 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 IGHV3-73A0A0B4J1V6 119 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 TMEM269A0A1B0GVZ9 245 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 GGTLC3B5MD39 225 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 PPP5D1E7EU14 171 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 PIRO00625 290 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 HMGB3O15347 200 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 NDUFB2O95178 105 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 SOD1P00441 154 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 IFNA21P01568 189 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 IGHV1-69P01742 117 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 C8GP07360 202 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 SMIM10L2AP0DMW4 78 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 SMIM10L2BP0DMW5 78 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 ZNF22P17026 224 aaPredicted RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 ERP29P30040 261 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 SERPINB1P30740 379 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 RAB13P51153 203 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 RBM11P57052 281 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 TFAMQ00059 246 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 HTR4Q13639 388 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 ALX1Q15699 326 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 IBA57Q5T440 356 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 AMMECR1LQ6DCA0 310 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 EIF4E3Q8N5X7 224 aaKnown RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 CNEP1R1Q8N9A8 125 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.6□□□□□ -2.15
UBR1-205ENST00000564540 SLC25A40Q8TBP6 338 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 GPR119Q8TDV5 335 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 IGF2BP2-AS1Q96M15 143 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 MIXL1Q9H2W2 232 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 DUSP21Q9H596 190 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 EFCAB1Q9HAE3 211 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 MED29Q9NX70 200 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 NDUFAF1Q9Y375 327 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 RALGAPA2Q2PPJ7 1873 aa1.6□□□□□ -2.15
UBR1-205ENST00000564540 DOCK3Q8IZD9 2030 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 DENND4BO75064 1496 aaPredicted RBP1.59□□□□□ -2.15
UBR1-205ENST00000564540 IGLV10-54A0A075B6I4 117 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 GPR31O00270 319 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 IGKV1-5P01602 117 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 PRM2P04554 102 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 RBP1P09455 135 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 NBEAP1P0C6P0 100 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 SMIM17P0DL12 118 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 CCL5P13501 91 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 IDO1P14902 403 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 S100A7P31151 101 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 FUSP35637 526 aaKnown RBP eCLIP1.59□□□□□ -2.15
UBR1-205ENST00000564540 LPAR6P43657 344 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 RPL27AP46776 148 aaKnown RBP1.59□□□□□ -2.15
UBR1-205ENST00000564540 TCTAP57738 103 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 TAS2R30P59541 319 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 CCL20P78556 96 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 TSNQ15631 228 aaKnown RBP1.59□□□□□ -2.15
UBR1-205ENST00000564540 Q6Q795 121 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 GRINAQ7Z429 371 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 PHF13Q86YI8 300 aaPredicted RBP1.59□□□□□ -2.15
UBR1-205ENST00000564540 EXOC3-AS1Q8N2X6 119 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 STX19Q8N4C7 294 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 OR10K1Q8NGX5 313 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 CLDND2Q8NHS1 167 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 PYDC1Q8WXC3 89 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 ACOT12Q8WYK0 555 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 SLC7A6Q92536 515 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 TOMM6Q96B49 74 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 ZHX1-C8orf76Q96EF9 292 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 CCDC90BQ9GZT6 254 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 C19orf12Q9NSK7 152 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 MCTS1Q9ULC4 181 aaKnown RBP1.59□□□□□ -2.15
UBR1-205ENST00000564540 SLC35A3Q9Y2D2 325 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 HEY1Q9Y5J3 304 aa1.59□□□□□ -2.15
UBR1-205ENST00000564540 TRPM3Q9HCF6 1732 aaPredicted RBP1.59□□□□□ -2.16
UBR1-205ENST00000564540 SYNMO15061 1565 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms