RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 KLHL30-AS1Q8NEE0 82 aa13□□□□□ -0.33
RNF40-206ENST00000564260 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
RNF40-206ENST00000564260 COA4Q9NYJ1 87 aa13□□□□□ -0.33
RNF40-206ENST00000564260 OR51B2Q9Y5P1 312 aa13□□□□□ -0.33
RNF40-206ENST00000564260 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 TRAV3A0A0B4J244 114 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 NUDT19A8MXV4 375 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 TRGV3P03979 118 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 RAB25P57735 213 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 HSPE1P61604 102 aaKnown RBP12.99□□□□□ -0.33
RNF40-206ENST00000564260 PDLIM3Q53GG5 364 aaPredicted RBP12.99□□□□□ -0.33
RNF40-206ENST00000564260 C10orf55Q5SWW7 151 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 SELENOHQ8IZQ5 122 aaKnown RBP12.99□□□□□ -0.33
RNF40-206ENST00000564260 NECAP1Q8NC96 275 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 FYTTD1Q96QD9 318 aaKnown RBP12.99□□□□□ -0.33
RNF40-206ENST00000564260 KLK15Q9H2R5 256 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 THYN1Q9P016 225 aa12.99□□□□□ -0.33
RNF40-206ENST00000564260 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 RBMXL2O75526 392 aaKnown RBP12.98□□□□□ -0.33
RNF40-206ENST00000564260 SFT2D2O95562 160 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
RNF40-206ENST00000564260 TPPP2P59282 170 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 DEFA1P59665 94 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 DEFA3P59666 94 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 TMEM268Q5VZI3 342 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 WFDC9Q8NEX5 89 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 OR5T1Q8NG75 326 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 PDCD10Q9BUL8 212 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.98□□□□□ -0.33
RNF40-206ENST00000564260 ZNF355PQ9NSJ1 428 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 TNCP24821 2201 aa12.98□□□□□ -0.33
RNF40-206ENST00000564260 C13orf42A0A1B0GVH6 325 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 A0A1B0GW64 132 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 CGB1A6NKQ9 187 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 E7EUB6 86 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 I3L521 148 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 DUS4LO95620 317 aaKnown RBP12.97□□□□□ -0.33
RNF40-206ENST00000564260 TSPAN15O95858 294 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 PF4P02776 101 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 SLC25A6P12236 298 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 VAMP1P23763 118 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 MECP2P51608 486 aaKnown RBP12.97□□□□□ -0.33
RNF40-206ENST00000564260 FHL3Q13643 280 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 LHFPL5Q8TAF8 219 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 P2RX4Q99571 388 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 TMED3Q9Y3Q3 217 aa12.97□□□□□ -0.33
RNF40-206ENST00000564260 A0A0B4J293 547 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 FAM240BA0A1B0GVZ2 78 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 A0A1W2PRX2 142 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 PLXNB1O43157 2135 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 TCRBP04435 133 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 OR8U8P0C7N1 319 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 DEFA4P12838 97 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 PPP1R1AQ13522 171 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 SLC35G3Q8N808 338 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 ZNF114Q8NC26 417 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 COQ8AQ8NI60 647 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 C20orf85Q9H1P6 137 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 TBC1D24Q9ULP9 559 aa12.96□□□□□ -0.33
RNF40-206ENST00000564260 VWFP04275 2813 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 A0A1B0GU03 582 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 HMX3A6NHT5 357 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 CCL24O00175 119 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
RNF40-206ENST00000564260 OR4E1P0C645 316 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 SULT1A3P0DMM9 295 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 SULT1A4P0DMN0 295 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 SPCS3P61009 180 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 ERHP84090 104 aaKnown RBP12.95□□□□□ -0.34
RNF40-206ENST00000564260 NMSQ5H8A3 153 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 CXorf58Q96LI9 332 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 PLEKHA3Q9HB20 300 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 NSG2Q9Y328 171 aa12.95□□□□□ -0.34
RNF40-206ENST00000564260 IGLV11-55A0A075B6I3 123 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 OR13C7P0DN81 318 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 AREGP15514 252 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 RHOGP84095 191 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 WT1-ASQ06250 92 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 ZNF616Q08AN1 781 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 DHRS2Q13268 280 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 ZNF343Q6P1L6 599 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 LCNL1Q6ZST4 164 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 LYG2Q86SG7 212 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 DUSP18Q8NEJ0 188 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 MCRIP2Q9BUT9 160 aaKnown RBP12.94□□□□□ -0.34
RNF40-206ENST00000564260 RANGRFQ9HD47 186 aaPredicted RBP12.94□□□□□ -0.34
RNF40-206ENST00000564260 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
RNF40-206ENST00000564260 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
RNF40-206ENST00000564260 FAM90A26D6RGX4 464 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 ST8SIA3O43173 380 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms