RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 IL3P08700 152 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 MYL12AP19105 171 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 TCL1AP56279 114 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 BTN3A2P78410 334 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 HLA-DRB3P79483 266 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 LRRC75BQ2VPJ9 315 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 LIN52Q52LA3 116 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 COMMD7Q86VX2 200 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 OR13D1Q8NGV5 346 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 JOSD2Q8TAC2 188 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 MUC7Q8TAX7 377 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 ANKRD36BP1Q96IX9 119 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 POLR1DQ9Y2S0 133 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 FIS1Q9Y3D6 152 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 CDC42BPGQ6DT37 1551 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 CACNA1SQ13698 1873 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 LMTK2Q8IWU2 1503 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 CRB1P82279 1406 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 RTL9Q8NET4 1388 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 KIF1BO60333 1816 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 TGIF2-C20orf24A0A0A6YYL0 155 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 C5orf49A4QMS7 147 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 LINC00862A6NCI5 91 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 PRORSD1PA6NEY8 169 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 PPP5D1E7EU14 171 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ATP6V1G2-DDX39BF2Z307 99 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 K7EQS6 105 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 GPR31O00270 319 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 STK16O75716 305 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 S1PR2O95136 353 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 MT-CO2P00403 227 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 IFNA1P01562 189 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 OR4A8P0C604 315 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 DAPP51397 102 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 TAS2R41P59536 307 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 TSNQ15631 228 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 ARHGAP11BQ3KRB8 267 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 N4BP2L1Q5TBK1 243 aaPredicted RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 C1orf195Q5TG92 126 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 GLT6D1Q7Z4J2 308 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ZHX1-C8orf76Q96EF9 292 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 CPNE2Q96FN4 548 aaPredicted RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 ABCG5Q9H222 651 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 OR51I1Q9H343 314 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 TMEM138Q9NPI0 162 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 DKKL1Q9UK85 242 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ASB4Q9Y574 426 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 COL14A1Q05707 1796 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 PIK3C2BO00750 1634 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 QSER1Q2KHR3 1735 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 XRN1Q8IZH2 1706 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 CD7P09564 240 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 CYBAP13498 195 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 AKR1C2P52895 323 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 NAA20P61599 178 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 GNG3P63215 75 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 WHAMMP3Q1A5X7 153 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 LGALSLQ3ZCW2 172 aaPredicted RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 HIST2H3PS2Q5TEC6 136 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 RPL13AP3Q6NVV1 102 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 SMARCD3Q6STE5 483 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 SCXQ7RTU7 201 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ATP5L2Q7Z4Y8 100 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 NAA40Q86UY6 237 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 LRRC18Q8N456 261 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 Q8WTZ3 238 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ASB17Q8WXJ9 295 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 C12orf43Q96C57 262 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 C2orf88Q9BSF0 95 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 BIN3Q9NQY0 253 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ASF1BQ9NVP2 202 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 SLC35A3Q9Y2D2 325 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 WASHC3Q9Y3C0 194 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 UFC1Q9Y3C8 167 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 HSPB11Q9Y547 144 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ATP7BP35670 1465 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 KIF1AQ12756 1690 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 TNRC6CQ9HCJ0 1690 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 TNS3Q68CZ2 1445 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 SPEF2Q9C093 1822 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 OTOFQ9HC10 1997 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 NRAPQ86VF7 1730 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 PLCH1Q4KWH8 1693 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 CCDC141Q6ZP82 1450 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 A0A087WUJ7 227 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 FAM159BA6NKW6 160 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 K7EP13 123 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 M0R381 172 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 BHLHE40O14503 412 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 CRYGDP07320 174 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 FAM228BP0C875 321 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 GZMHP20718 246 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 COL8A2P25067 703 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 ERP29P30040 261 aaKnown RBP1.33□□□□□ -2.2
CHD9-209ENST00000564255 CCR7P32248 378 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 CA7P43166 264 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 KRTAP10-10P60014 251 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 SLC35A2P78381 396 aa1.33□□□□□ -2.2
CHD9-209ENST00000564255 DEFB134Q4QY38 66 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms