RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CITED4Q96RK1 184 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 RETNQ9HD89 108 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 THYN1Q9P016 225 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 TEX50A0A1B0GTY4 177 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 ZNF785A8K8V0 405 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 CYB5BO43169 146 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 SNAPC5O75971 98 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 APOA1P02647 267 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 ELK1P19419 428 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 CBLN1P23435 193 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 LYSMD2Q8IV50 215 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 LAX1Q8IWV1 398 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 GPX8Q8TED1 209 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 SRSF8Q9BRL6 282 aaKnown RBP13.34□□□□□ -0.27
NME3-205ENST00000563854 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
NME3-205ENST00000563854 CEPT1Q9Y6K0 416 aa13.34□□□□□ -0.27
NME3-205ENST00000563854 IGHV3-21A0A0B4J1V1 117 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 TMEM213A2RRL7 107 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 FAM25AB3EWG3 89 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 FAM25CB3EWG5 89 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 FAM25GB3EWG6 89 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 S100GP29377 79 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 RCVRNP35243 200 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 ZNF57Q68EA5 555 aaPredicted RBP13.33□□□□□ -0.28
NME3-205ENST00000563854 SLC25A24Q6NUK1 477 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 GDPD1Q8N9F7 314 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 UXS1Q8NBZ7 420 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 ZNF502Q8TBZ5 544 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 SRD5A3Q9H8P0 318 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 MLXQ9UH92 298 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 OR51B2Q9Y5P1 312 aa13.33□□□□□ -0.28
NME3-205ENST00000563854 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 SCAF4O95104 1147 aaKnown RBP13.32□□□□□ -0.28
NME3-205ENST00000563854 IFNA6P05013 189 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 RORCP51449 518 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 WT1-ASQ06250 92 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 KLK9Q2XQG4 91 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 ZNF585BQ52M93 769 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 TM4SF20Q53R12 229 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 THOC7Q6I9Y2 204 aaKnown RBP13.32□□□□□ -0.28
NME3-205ENST00000563854 UNQ9165/PRO28630Q6UXU0 137 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 LSM10Q969L4 123 aaKnown RBP13.32□□□□□ -0.28
NME3-205ENST00000563854 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 NAA50Q9GZZ1 169 aaKnown RBP13.32□□□□□ -0.28
NME3-205ENST00000563854 SCPEP1Q9HB40 452 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 KLK9Q9UKQ9 250 aa13.32□□□□□ -0.28
NME3-205ENST00000563854 OR2T8A6NH00 312 aa13.31□□□□□ -0.28
NME3-205ENST00000563854 A8MWP6 167 aa13.31□□□□□ -0.28
NME3-205ENST00000563854 M0QYG6 137 aa13.31□□□□□ -0.28
NME3-205ENST00000563854 SERPINE2P07093 398 aa13.31□□□□□ -0.28
NME3-205ENST00000563854 MZT2AQ6P582 158 aa13.31□□□□□ -0.28
NME3-205ENST00000563854 HSD17B13Q7Z5P4 300 aaPredicted RBP13.31□□□□□ -0.28
NME3-205ENST00000563854 TBC1D26Q86UD7 250 aa13.31□□□□□ -0.28
NME3-205ENST00000563854 TGOLN2O43493 480 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 FGF2P09038 288 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 PTBP1P26599 531 aaKnown RBP eCLIP13.3□□□□□ -0.28
NME3-205ENST00000563854 LPCAT3Q6P1A2 487 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 SLC16A13Q7RTY0 426 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 UBAC2Q8NBM4 344 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 OR52B4Q8NGK2 314 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 CMTM3Q96MX0 182 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 NDUFA4L2Q9NRX3 87 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 PRNDQ9UKY0 176 aa13.3□□□□□ -0.28
NME3-205ENST00000563854 RBMY1BA6NDE4 496 aaKnown RBP13.29□□□□□ -0.28
NME3-205ENST00000563854 RBMY1EA6NEQ0 496 aaKnown RBP13.29□□□□□ -0.28
NME3-205ENST00000563854 RBMY1DP0C7P1 496 aaKnown RBP13.29□□□□□ -0.28
NME3-205ENST00000563854 SMIM18P0DKX4 95 aa13.29□□□□□ -0.28
NME3-205ENST00000563854 PGAM2P15259 253 aa13.29□□□□□ -0.28
NME3-205ENST00000563854 VN1R17PQ8TDU5 208 aa13.29□□□□□ -0.28
NME3-205ENST00000563854 AP3S1Q92572 193 aa13.29□□□□□ -0.28
NME3-205ENST00000563854 TMEM56Q96MV1 263 aa13.29□□□□□ -0.28
NME3-205ENST00000563854 UFC1Q9Y3C8 167 aa13.29□□□□□ -0.28
NME3-205ENST00000563854 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
NME3-205ENST00000563854 DBX1A6NMT0 343 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 C15orf61A6NNL5 157 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 MFAP2P55001 183 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 Q56UQ5 140 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 GPR107Q5VW38 600 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 RBPMS2Q6ZRY4 209 aaKnown RBP13.28□□□□□ -0.28
NME3-205ENST00000563854 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 MRGPRFQ96AM1 343 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 TSC22D3Q99576 134 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 HIPK2Q9H2X6 1198 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 GAR1Q9NY12 217 aaKnown RBP13.28□□□□□ -0.28
NME3-205ENST00000563854 FKBP11Q9NYL4 201 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 C21orf62Q9NYP8 219 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 EXTL2Q9UBQ6 330 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 DNAH7Q8WXX0 4024 aa13.28□□□□□ -0.28
NME3-205ENST00000563854 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 GABARAPO95166 117 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 PI3P19957 117 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 RNASE10Q5GAN6 216 aaKnown RBP13.27□□□□□ -0.29
NME3-205ENST00000563854 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.29
NME3-205ENST00000563854 H2BFWTQ7Z2G1 175 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms