RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZFP41Q8N8Y5 198 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 ASCC1Q8N9N2 400 aaKnown RBP3.45□□□□□ -1.86
LINC00254-201ENST00000563416 PXT1Q8NFP0 134 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 OR51A2Q8NGJ7 313 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 OR5D14Q8NGL3 314 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 LRRC20Q8TCA0 184 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 CAPSLQ8WWF8 208 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 GHSRQ92847 366 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 MYDGFQ969H8 173 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 TMEM106AQ96A25 262 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 CEP19Q96LK0 163 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 ZNF184Q99676 751 aaPredicted RBP3.45□□□□□ -1.86
LINC00254-201ENST00000563416 MND1Q9BWT6 205 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 SELENOIQ9C0D9 397 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 ACTR3CQ9C0K3 210 aaPredicted RBP3.45□□□□□ -1.86
LINC00254-201ENST00000563416 RHOFQ9HBH0 211 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 ZC4H2Q9NQZ6 224 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 SCN3BQ9NY72 215 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 TPRKBQ9Y3C4 175 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
LINC00254-201ENST00000563416 TRAV40A0A0B4J280 105 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CENPVL3A0A0U1RRI6 287 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 K7N7A8 449 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 M0R1W7 72 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 PPP1R2P9O14990 202 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 DENRO43583 198 aaKnown RBP3.44□□□□□ -1.86
LINC00254-201ENST00000563416 TCF21O43680 179 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 HSBP1O75506 76 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 SC5DO75845 299 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CYB5AP00167 134 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 OCM2P0CE71 109 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CELP19835 753 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 RAB3AP20336 220 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 VDAC1P21796 283 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 GABRA2P47869 451 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 GABARAPL2P60520 117 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 TPBGQ13641 420 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 VAMP3Q15836 100 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 ZNF79Q15937 498 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 ELP2Q6IA86 826 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 UNQ9370/PRO34162Q6UXP9 181 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 ASCL4Q6XD76 172 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CCDC71LQ8N9Z2 235 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 OR51T1Q8NGJ9 327 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 LYPD6BQ8NI32 183 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 NDNFQ8TB73 568 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 ZNF418Q8TF45 676 aaPredicted RBP3.44□□□□□ -1.86
LINC00254-201ENST00000563416 TNFRSF14Q92956 283 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 PHYHIPLQ96FC7 376 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CPNE2Q96FN4 548 aaPredicted RBP3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CNBD2Q96M20 576 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 DERL3Q96Q80 235 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 SPACA5Q96QH8 159 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 OR5M11Q96RB7 305 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 HIST1H4GQ99525 98 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 SUCNR1Q9BXA5 334 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 HMG20AQ9NP66 347 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 ISYNA1Q9NPH2 558 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 TMEM138Q9NPI0 162 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 C19orf12Q9NSK7 152 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 RBFOX1Q9NWB1 397 aaKnown RBP3.44□□□□□ -1.86
LINC00254-201ENST00000563416 TAS2R4Q9NYW5 299 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 KCNIP1Q9NZI2 227 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 CCDC59Q9P031 241 aaKnown RBP3.44□□□□□ -1.86
LINC00254-201ENST00000563416 Q9UF83 564 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 ERGIC3Q9Y282 383 aa3.44□□□□□ -1.86
LINC00254-201ENST00000563416 PKD1L1Q8TDX9 2849 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 TET2Q6N021 2002 aaPredicted RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 TRAV8-7A0A075B6U6 113 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 IGHV1-69DA0A0B4J2H0 117 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 RNASEK-C17orf49H0YIS7 233 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 CLDN34H7C241 214 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 SIVA1O15304 175 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 PIN1P1O15428 100 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 ANGPTL7O43827 346 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 MRPS14O60783 128 aaKnown RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 CLPXO76031 633 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 HAND1O96004 215 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 IGHV1-69P01742 117 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 RBP4P02753 201 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 CSN2P05814 226 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 CD37P11049 281 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 IGLL1P15814 213 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 ERP29P30040 261 aaKnown RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 ZNF93P35789 620 aaPredicted RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 OR3A4PP47883 348 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 DLX6P56179 175 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 ARF6P62330 175 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 RPL31P62899 125 aaKnown RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 PPP3R1P63098 170 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 MEF2CQ06413 473 aaPredicted RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 MLLT11Q13015 90 aaPredicted RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 TRAM1Q15629 374 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 USF2Q15853 346 aaPredicted RBP3.43□□□□□ -1.86
LINC00254-201ENST00000563416 AANATQ16613 207 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 SOHLH1Q5JUK2 328 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 VAX1Q5SQQ9 334 aa3.43□□□□□ -1.86
LINC00254-201ENST00000563416 GPR157Q5UAW9 335 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms