RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 OR4A47Q6IF82 309 aa12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 BET1LQ9NYM9 111 aa12.52□□□□□ -0.41
HDGFL3-203ENST00000563404 TRBV7-1A0A0A6YYK4 115 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 TRAV3A0A0B4J244 114 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 IGHV3-35A0A0C4DH35 117 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 RGS5O15539 181 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 HRASP01112 189 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 EIF4EP06730 217 aaKnown RBP12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 OR2B8PP59922 312 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 C6orf62Q9GZU0 229 aaPredicted RBP12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 AUNIPQ9H7T9 357 aa12.51□□□□□ -0.41
HDGFL3-203ENST00000563404 TRAV18A0A075B6X5 111 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 IGLC7A0M8Q6 106 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 DHFRP00374 187 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 DEFA4P12838 97 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 GPR183P32249 361 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 S100A5P33763 92 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 ZNF585BQ52M93 769 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 TMEM69Q5SWH9 247 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 SPAG16Q8N0X2 631 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 GVQW1Q8N7I0 195 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 OR4A5Q8NH83 315 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 SECTM1Q8WVN6 248 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 SOSTQ9BQB4 213 aa12.5□□□□□ -0.41
HDGFL3-203ENST00000563404 A0A0J9YWU9 116 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 FAM25AB3EWG3 89 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 FAM25CB3EWG5 89 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 FAM25GB3EWG6 89 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 SULT1C2O00338 296 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 PTBP1P26599 531 aaKnown RBP eCLIP12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 FCGR2CP31995 323 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 TNFSF8P32971 234 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 MSMO1Q15800 293 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 ANKRD55Q3KP44 614 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 OR1L6Q8NGR2 347 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 CXorf58Q96LI9 332 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 ZNF436Q9C0F3 470 aaPredicted RBP12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 SCPEP1Q9HB40 452 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 HRASLSQ9HDD0 168 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 PTTG2Q9NZH5 202 aa12.49□□□□□ -0.41
HDGFL3-203ENST00000563404 TRAV25A0A0B4J276 109 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 UPK2O00526 184 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 LY6G6CO95867 125 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 ETV6P41212 452 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 CBX5P45973 191 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 TAS2R20P59543 309 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 POU2AF1Q16633 256 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 WFDC3Q8IUB2 231 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 OR10W1Q8NGF6 305 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 MARC2Q969Z3 335 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 DIRAS2Q96HU8 199 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 MRPL27Q9P0M9 148 aaKnown RBP12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 EXTL2Q9UBQ6 330 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 UBQLN2Q9UHD9 624 aa12.48□□□□□ -0.41
HDGFL3-203ENST00000563404 CXorf65A6NEN9 183 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 RBFOX2O43251 390 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 PPYP01298 95 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 PRSS3P35030 304 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 ELLP55199 621 aaPredicted RBP12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 TAS2R31P59538 309 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 ARPC4P59998 168 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 HOGA1Q86XE5 327 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
HDGFL3-203ENST00000563404 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 CTDSPLO15194 276 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 FCER2P06734 321 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 TNFRSF9Q07011 255 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 PLET1Q6UQ28 207 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 ZNF818PQ6ZRF7 136 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 ZBTB34Q8NCN2 500 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 TMEM190Q8WZ59 177 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 SLC5A7Q9GZV3 580 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 TMEM140Q9NV12 185 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
HDGFL3-203ENST00000563404 FABP12A6NFH5 140 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 TGOLN2O43493 480 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 SPRY2O43597 315 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 S1PR2O95136 353 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 HPRT1P00492 218 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 RPA2P15927 270 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 NQO2P16083 231 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 MFAP2P55001 183 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 FXYD4P59646 89 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 WT1-ASQ06250 92 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 DEFB135Q30KP9 77 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 Q6ZWC4 215 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 GPX8Q8TED1 209 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 SPAG8Q99932 426 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms