RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 UBAC2Q8NBM4 344 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 OR10W1Q8NGF6 305 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 SRSF8Q9BRL6 282 aaKnown RBP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 ZNF436Q9C0F3 470 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 DAZ1Q9NQZ3 744 aaKnown RBP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 IGHV3OR16-8A0A075B7F1 116 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 OR4C46A6NHA9 309 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 UBE2CO00762 179 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 TSPAN4O14817 238 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 S1PR2O95136 353 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 TRAPPC2P0DI81 140 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 TRAPPC2BP0DI82 140 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
SF3B3-202ENST00000562722 GABARAPL2P60520 117 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 HERV-K104P61576 105 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 UBE2UQ5VVX9 321 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 GDPD1Q8N9F7 314 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 CD300LFQ8TDQ1 290 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 VN1R17PQ8TDU5 208 aa9.65□□□□□ -0.86
SF3B3-202ENST00000562722 ZNF207O43670 478 aaKnown RBP9.64□□□□□ -0.87
SF3B3-202ENST00000562722 SDC2P34741 201 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 Q56UQ5 140 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
SF3B3-202ENST00000562722 ZNF818PQ6ZRF7 136 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 HSD17B13Q7Z5P4 300 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-202ENST00000562722 OR5H6Q8NGV6 325 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 BSCL2Q96G97 398 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-202ENST00000562722 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-202ENST00000562722 PLEKHA2Q9HB19 425 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 C21orf62Q9NYP8 219 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 ETV7Q9Y603 341 aa9.64□□□□□ -0.87
SF3B3-202ENST00000562722 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 LOC100506127A0A0U1RQW1 187 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 TEX50A0A1B0GTY4 177 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 MEIS3P1A6NDR6 274 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 MRPS14O60783 128 aaKnown RBP9.63□□□□□ -0.87
SF3B3-202ENST00000562722 SERPINE2P07093 398 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 CLEC2LP0C7M8 214 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 POU2AF1Q16633 256 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 ZNF773Q6PK81 442 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 SPARTQ8N0X7 666 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 KIR2DL5AQ8N109 375 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 TSPAN14Q8NG11 270 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 OR1L8Q8NGR8 309 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 KIR2DL5BQ8NHK3 375 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 FCGR1BQ92637 280 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 BORCS5Q969J3 196 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 RNF183Q96D59 192 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 SLC25A38Q96DW6 304 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 DIABLOQ9NR28 239 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 COMMD9Q9P000 198 aa9.63□□□□□ -0.87
SF3B3-202ENST00000562722 A0A0A6YYH2 397 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 A6NJ64 397 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 MARCH11A6NNE9 402 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 NDUFA4O00483 81 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 SNAPC5O75971 98 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 RLN1P04808 185 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 CTSDP07339 412 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-202ENST00000562722 CBX5P45973 191 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 OR5AP2Q8NGF4 316 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 GIMAP1Q8WWP7 306 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
SF3B3-202ENST00000562722 GALNT14Q96FL9 552 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 CHRDL1Q9BU40 450 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 AUNIPQ9H7T9 357 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 EHFQ9NZC4 300 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 RAB26Q9ULW5 256 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 NSG2Q9Y328 171 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 OR51B2Q9Y5P1 312 aa9.62□□□□□ -0.87
SF3B3-202ENST00000562722 F11RQ9Y624 299 aaKnown RBP9.62□□□□□ -0.87
SF3B3-202ENST00000562722 IGKV3-7A0A075B6H7 116 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 YIF1AO95070 293 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 KRASP01116 189 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 FGF2P09038 288 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 FCGR2BP31994 310 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-202ENST00000562722 TFPI2P48307 235 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 SCAND1P57086 179 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 APRG1Q8IVJ8 170 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 RPP25LQ8N5L8 163 aaKnown RBP9.61□□□□□ -0.87
SF3B3-202ENST00000562722 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-202ENST00000562722 RNF167Q9H6Y7 350 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 MAP6D1Q9H9H5 199 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 NDUFA4L2Q9NRX3 87 aa9.61□□□□□ -0.87
SF3B3-202ENST00000562722 IGHV3-49A0A0A0MS15 119 aa9.6□□□□□ -0.87
SF3B3-202ENST00000562722 ATF4P18848 351 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-202ENST00000562722 GNRHRP30968 328 aa9.6□□□□□ -0.87
SF3B3-202ENST00000562722 G6PCP35575 357 aa9.6□□□□□ -0.87
SF3B3-202ENST00000562722 LPAR6P43657 344 aa9.6□□□□□ -0.87
SF3B3-202ENST00000562722 MFAP2P55001 183 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms