RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CD5LO43866 347 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 CX3CL1P78423 397 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TBR1Q16650 682 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 MRPL54Q6P161 138 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 PCSK4Q6UW60 755 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TMEM251Q8N6I4 163 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 DEFB124Q8NES8 71 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 OR8B3Q8NGG8 313 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 OR8B2Q96RD0 313 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 OR2W1Q9Y3N9 320 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 ZNF318Q5VUA4 2279 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 C21orf140B9A014 251 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 SYNGR3O43761 229 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 EDDM3BP56851 147 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 RPL31P62899 125 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 SCCPDHQ8NBX0 429 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 GP6Q9HCN6 339 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 ATP23Q9Y6H3 246 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 ARL2-SNX15V9GYD0 113 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 NBEAQ8NFP9 2946 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 AHRRA9YTQ3 701 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 MRPL33O75394 65 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 ARL14EPLP0DKL9 152 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 SPINK2P20155 84 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 PIGCQ92535 297 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 NINJ1Q92982 152 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 CHRDL1Q9BU40 450 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 DEFB127Q9H1M4 99 aa11.67□□□□□ -0.54
GTF3C1-203ENST00000562609 CRYGSP22914 178 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 ZNF585BQ52M93 769 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 SLC25A34Q6PIV7 304 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 KIR3DL3Q8N743 410 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 DIDO1Q9BTC0 2240 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 CPT1CQ8TCG5 803 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 PRRG4Q9BZD6 226 aa11.66□□□□□ -0.54
GTF3C1-203ENST00000562609 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 OR4C46A6NHA9 309 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 C2orf70A6NJV1 201 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 DNPH1O43598 174 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 CLDN14O95500 239 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 APCSP02743 223 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 FXYD3Q14802 87 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 FNDC4Q9H6D8 234 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 ST20Q9HBF5 79 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 ATMQ13315 3056 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 HLA-DQA1P01909 254 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 MEOX1P50221 254 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 OR2H1Q9GZK4 316 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 OR2D2Q9H210 308 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 ABI3Q9P2A4 366 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 IL36RNQ9UBH0 155 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 B4GALT7Q9UBV7 327 aa11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 YTHDF2Q9Y5A9 579 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-203ENST00000562609 DMXL2Q8TDJ6 3036 aa11.65□□□□□ -0.55
GTF3C1-203ENST00000562609 C7orf71A4D174 169 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 AMY1AP04745 511 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 SRSF7Q16629 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 C20orf204Q6ZNR8 217 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 FGFRL1Q8N441 504 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 OR5A2Q8NGI9 324 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 SLC25A40Q8TBP6 338 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 TXNDC17Q9BRA2 123 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 RNASE7Q9H1E1 156 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 A0A087X0K7 114 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM231BA6NCW3 169 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 ZNF503-AS2A6NEH8 195 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 RRHO14718 337 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 NKX2-8O15522 239 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 BCL3P20749 454 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 RNFT1Q5M7Z0 435 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 TMEM42Q69YG0 159 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 RNASEKQ6P5S7 137 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 RAB1CQ92928 201 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 WISP2O76076 250 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 SP1P08047 785 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 GPR6P46095 362 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 SLAQ13239 276 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 GABRA6Q16445 453 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 TMEM249Q2WGJ8 235 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 KCNS2Q9ULS6 477 aa11.64□□□□□ -0.55
GTF3C1-203ENST00000562609 HAND1O96004 215 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 IGLV2-14P01704 120 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 COX19Q49B96 90 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms