RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ESPL1Q14674 2120 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 HIVEP2P31629 2446 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 IGSF23A1L1A6 192 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 C3orf84H3BNL1 204 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 ATP8B1O43520 1251 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 DENRO43583 198 aaKnown RBP2.86□□□□□ -1.95
SMG1-204ENST00000561940 ORM2P19652 201 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 PSMB3P49720 205 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 EMP2P54851 167 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 ARPP19P56211 112 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 ACTBP60709 375 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 ACTG1P63261 375 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 ITGB3BPQ13352 177 aaPredicted RBP2.86□□□□□ -1.95
SMG1-204ENST00000561940 CST6Q15828 149 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 MESTQ5EB52 335 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 DNM1P34Q6PK57 102 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 DRAM2Q6UX65 266 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 ZFAND2AQ8N6M9 145 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 NATD1Q8N6N6 113 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 DDI1Q8WTU0 396 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 CYGBQ8WWM9 190 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 PSTPIP2Q9H939 334 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 FIS1Q9Y3D6 152 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 SNX10Q9Y5X0 201 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 EML5Q05BV3 1969 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
SMG1-204ENST00000561940 METTL15A6NJ78 407 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 GOLGA8KD6RF30 607 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 GOLGA8MH3BSY2 632 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 ARL6IP5O75915 188 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 PPP1CCP36873 323 aaKnown RBP2.85□□□□□ -1.95
SMG1-204ENST00000561940 RPL14P50914 215 aaKnown RBP2.85□□□□□ -1.95
SMG1-204ENST00000561940 AKR1C2P52895 323 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 DAD1P61803 113 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 SMAGPQ0VAQ4 97 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 HLA-DRB5Q30154 266 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 TMEM251Q8N6I4 163 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 OR51H1Q8NH63 302 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 CD200R1Q8TD46 325 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 TNFAIP8L1Q8WVP5 186 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 MRPL16Q9NX20 251 aaKnown RBP2.85□□□□□ -1.95
SMG1-204ENST00000561940 USE1Q9NZ43 259 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 CCL26Q9Y258 94 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 CRYBG3Q68DQ2 2970 aa2.85□□□□□ -1.95
SMG1-204ENST00000561940 OCM2P0CE71 109 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 CD79BP40259 229 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 PPCDCQ96CD2 204 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 EIF5A2Q9GZV4 153 aaKnown RBP2.84□□□□□ -1.95
SMG1-204ENST00000561940 PLEKHJ1Q9NW61 149 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 FAM206AQ9NX38 181 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 LINC00527Q9UJ94 153 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 VPREB3Q9UKI3 123 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 TP53TG1Q9Y2A0 90 aa2.84□□□□□ -1.95
SMG1-204ENST00000561940 ACANP16112 2415 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 LOC102725191A0A1B0GVB3 256 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 COCHO43405 550 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 ZNF73O43830 326 aaPredicted RBP2.83□□□□□ -1.96
SMG1-204ENST00000561940 HBZP02008 142 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 APOEP02649 317 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 LINC00614P0C842 121 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 MAGEA2P43356 314 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 PDK2Q15119 407 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 MNS1Q8NEH6 495 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 OR10P1Q8NGE3 313 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 OR4C6Q8NH72 309 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 SMIM19Q96E16 107 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 ARL5BQ96KC2 179 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 DHRS9Q9BPW9 319 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 MYH4Q9Y623 1939 aa2.83□□□□□ -1.96
SMG1-204ENST00000561940 MYH8P13535 1937 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 C17orf98A8MV24 154 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 COPEO14579 308 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 SSNA1O43805 119 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 CRYGDP07320 174 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 COX6B1P14854 86 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 HMGA1P17096 107 aaKnown RBP2.82□□□□□ -1.96
SMG1-204ENST00000561940 LINC00313P59037 77 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 PSG4Q00888 419 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 SLC36A2Q495M3 483 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 FAM229BQ4G0N7 80 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 Q6ZRU5 148 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 MED18Q9BUE0 208 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 SLC22A4Q9H015 551 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 OR51B6Q9H340 312 aa2.82□□□□□ -1.96
SMG1-204ENST00000561940 MRPS16Q9Y3D3 137 aaKnown RBP2.82□□□□□ -1.96
SMG1-204ENST00000561940 TNRC6BQ9UPQ9 1833 aaKnown RBP2.82□□□□□ -1.96
SMG1-204ENST00000561940 HELZP42694 1942 aaKnown RBP2.81□□□□□ -1.96
SMG1-204ENST00000561940 DSCAMO60469 2012 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 CSMD1Q96PZ7 3565 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 POLEQ07864 2286 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 TLN2Q9Y4G6 2542 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 A8MWP6 167 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 G3V3Q6 166 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 AZIN1O14977 448 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 PSMG1O95456 288 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 CRYBA1P05813 215 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms