RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 IGHV2-26A0A0B4J1V2 119 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 KBTBD11-OT1A0A1B0GTJ5 212 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 SERTM2A0A1B0GWG4 89 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 A0A1W2PRD5 423 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 A0A1W2PRF3 423 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 A0A1W2PRM7 423 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 TMEM120BA0PK00 339 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 H7C1C5 153 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 J3QT63 122 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 FFAR1O14842 300 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 SNAI2O43623 268 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 AIREO43918 545 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 IFNGP01579 166 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 IGHG2P01859 326 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 IFNA6P05013 189 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 SERPINE2P07093 398 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 RPSAP08865 295 aaKnown RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 HIST1H1CP16403 213 aaKnown RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 HSD11B1P28845 292 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 GPX4P36969 197 aaPredicted RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 GABRA2P47869 451 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 DLX6P56179 175 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 MTPNP58546 118 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 LCN6P62502 163 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 TSPAN31Q12999 210 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 PRDX4Q13162 271 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 KLRD1Q13241 179 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 SPIN3Q5JUX0 258 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 ZNF826PQ6ZT77 177 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 CCDC121Q6ZUS5 278 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 Q6ZVH6 145 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 DCXRQ7Z4W1 244 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 MRPL55Q7Z7F7 128 aaKnown RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 WDR86Q86TI4 376 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 NAA40Q86UY6 237 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 Q8N976 141 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 CHST4Q8NCG5 386 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 C19orf18Q8NEA5 215 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 OR52L1Q8NGH7 329 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 OR9G4Q8NGQ1 327 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 OR6Q1Q8NGQ2 317 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 OR10J6PQ8NGY7 276 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 OR2T27Q8NH04 317 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 C4orf3Q8WVX3 66 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 C17orf50Q8WW18 174 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 AQP3Q92482 292 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 RORBQ92753 470 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 SLAMF6Q96DU3 332 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 ZNF714Q96N38 554 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 ERMAPQ96PL5 475 aaPredicted RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 NMNAT3Q96T66 252 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 PAIP2Q9BPZ3 127 aaKnown RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 NDFIP1Q9BT67 221 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 TMEM133Q9H2Q1 129 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 GAL3ST2Q9H3Q3 398 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 RPP21Q9H633 154 aaKnown RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 EDA2RQ9HAV5 297 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 HES4Q9HCC6 221 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 HMG20AQ9NP66 347 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 C19orf12Q9NSK7 152 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 ST3GAL6Q9Y274 331 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 RHBDD3Q9Y3P4 386 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 AMMECR1Q9Y4X0 333 aaPredicted RBP2.36□□□□□ -2.03
HERC1-215ENST00000561436 HSPE1-MOB4S4R3N1 261 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 MPDZO75970 2070 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.36□□□□□ -2.033e-14■□□□□ 8.3
HERC1-215ENST00000561436 FREM3P0C091 2139 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 NCKAP5O14513 1909 aa2.36□□□□□ -2.03
HERC1-215ENST00000561436 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 IGKV2D-24A0A075B6R9 120 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 A0A1B0GW55 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DHRS12A0PJE2 317 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ARRDC5A6NEK1 342 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 RFPL4AA6NLU0 287 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 SERPINE3A8MV23 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 SEC14L6B5MCN3 397 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 RFPL4AL1F8VTS6 287 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 LY6LH3BQJ8 138 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 BUB1B-PAK6H3BSN5 160 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF593O00488 134 aaPredicted RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 AKR7A2O43488 359 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF737O75373 536 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF682O95780 498 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 SERPINA1P01009 418 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 CSN2P05814 226 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4L2P0CJ85 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4L3P0CJ86 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4L5P0CJ88 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4L6P0CJ89 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4L7P0CJ90 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DTYMKP23919 212 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 OR1E2P47887 323 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 RAB7AP51149 207 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF121P58317 390 aaPredicted RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 FXYD6P3P58550 94 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DYNC1I2Q13409 638 aaKnown RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 EBI3Q14213 229 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 Q3ZCU0 254 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF684Q5T5D7 378 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms