RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 HSD17B13Q7Z5P4 300 aaPredicted RBP8.24□□□□□ -1.09
USP3-219ENST00000561326 CIARTQ8N365 385 aaPredicted RBP8.24□□□□□ -1.09
USP3-219ENST00000561326 Q8N6K4 173 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 OR10P1Q8NGE3 313 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 ZDHHC16Q969W1 377 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 RBMXL1Q96E39 390 aaKnown RBP8.24□□□□□ -1.09
USP3-219ENST00000561326 RASL11BQ9BPW5 248 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 ZNF471Q9BX82 626 aaPredicted RBP8.24□□□□□ -1.09
USP3-219ENST00000561326 NDUFA4L2Q9NRX3 87 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 SETXQ7Z333 2677 aaKnown RBP8.23□□□□□ -1.09
USP3-219ENST00000561326 VPS13CQ709C8 3753 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 IGSF23A1L1A6 192 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 INS-IGF2F8WCM5 200 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 H3BP45 60 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 CD5LO43866 347 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 DFFBO76075 338 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 CST7O76096 145 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 IFNA7P01567 189 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 OPN1MWP04001 364 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 OR8U8P0C7N1 319 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 METTL15P1P0C7V9 234 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 OPN1MW2P0DN77 364 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 OPN1MW3P0DN78 364 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 VDAC2P45880 294 aaPredicted RBP8.23□□□□□ -1.09
USP3-219ENST00000561326 COMPP49747 757 aaPredicted RBP8.23□□□□□ -1.09
USP3-219ENST00000561326 GNB1P62873 340 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 UBA52P62987 128 aaKnown RBP8.23□□□□□ -1.09
USP3-219ENST00000561326 ZNF266Q14584 549 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 FAM120AOSQ5T036 256 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 TMEM14EPQ6UXP3 125 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 ZNF562Q6V9R5 426 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 PINX1Q96BK5 328 aaKnown RBP8.23□□□□□ -1.09
USP3-219ENST00000561326 SRSF8Q9BRL6 282 aaKnown RBP8.23□□□□□ -1.09
USP3-219ENST00000561326 CELSR1Q9NYQ6 3014 aa8.23□□□□□ -1.09
USP3-219ENST00000561326 TLN2Q9Y4G6 2542 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 BTBD17A6NE02 478 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 M0QZK8 103 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 TSPAN9O75954 239 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 FSHBP01225 129 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 IFNA4P05014 189 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 TPT1P13693 172 aaKnown RBP8.22□□□□□ -1.09
USP3-219ENST00000561326 HNF1AP20823 631 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 TMEM267Q0VDI3 215 aaPredicted RBP8.22□□□□□ -1.09
USP3-219ENST00000561326 FXYD3Q14802 87 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 EIF5AL1Q6IS14 154 aaKnown RBP8.22□□□□□ -1.09
USP3-219ENST00000561326 C9orf139Q6ZV77 190 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 LILRB2Q8N423 598 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 TMEM217Q8N7C4 229 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 SLC24A4Q8NFF2 622 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 OR5C1Q8NGR4 320 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
USP3-219ENST00000561326 SLC25A33Q9BSK2 321 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 SMIM3Q9BZL3 60 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 FBXL17Q9UF56 701 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 NOTCH2Q04721 2471 aa8.22□□□□□ -1.09
USP3-219ENST00000561326 H3BUX3 64 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 FCN1O00602 326 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 FGF16O43320 207 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 CA2P00918 260 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 IFNA5P01569 189 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 OR13C7P0DN81 318 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 MYOD1P15172 320 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 NPY1RP25929 384 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.1
USP3-219ENST00000561326 SLC38A11Q08AI6 406 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 SCGB2A2Q13296 93 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 OR8G2PQ6IF36 304 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 SLC25A24Q6NUK1 477 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 TEX261Q6UWH6 196 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 CLEC9AQ6UXN8 241 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 ETV3LQ6ZN32 361 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 ZNF767PQ75MW2 155 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 C16orf82Q7Z2V1 217 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 UBAC2Q8NBM4 344 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 OR10W1Q8NGF6 305 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 OR5R1Q8NH85 324 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 SCGB1C1Q8TD33 95 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.1
USP3-219ENST00000561326 ATP5SQ99766 215 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 MOB4Q9Y3A3 225 aa8.21□□□□□ -1.1
USP3-219ENST00000561326 CSMD2Q7Z408 3487 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 NBPF19A0A087WUL8 3843 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 ACANP16112 2415 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 C15orf62A8K5M9 175 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 CYB5BO43169 146 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 HLA-DRB1P01911 266 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 CX3CL1P78423 397 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 CLINT1Q14677 625 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 MRGPRG-AS1Q2M3A8 158 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 DEFB112Q30KQ8 113 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 STPG2Q8N412 459 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 Q8N9W7 124 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 OR1L6Q8NGR2 347 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 PIFOQ8TCI5 191 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms