RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	ATF4	P18848	351 aa	Predicted RBP	10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	GPR183	P32249	361 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	CBX5	P45973	191 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	MXD1	Q05195	221 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	WT1-AS	Q06250	92 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	TNFRSF9	Q07011	255 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	IDNK	Q5T6J7	187 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	SLC38A6	Q8IZM9	456 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	GDPD1	Q8N9F7	314 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	OR1L6	Q8NGR2	347 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	SPAG8	Q99932	426 aa	Predicted RBP	10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	QTRT1	Q9BXR0	403 aa	Known RBP	10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	NDUFA4L2	Q9NRX3	87 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	TMEM140	Q9NV12	185 aa		10.14	□□□□□ -0.79
RNF31-223	ENST00000560754	IGHV3-35	A0A0C4DH35	117 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754		K7EMT4	169 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	UBE2C	O00762	179 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	OR13C7	P0DN81	318 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	F2R	P25116	425 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	MFAP2	P55001	183 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	SPSB3	Q6PJ21	355 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	TMEM190	Q8WZ59	177 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	LINC00476	Q8WZB0	136 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	BORCS5	Q969J3	196 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	BSCL2	Q96G97	398 aa	Predicted RBP	10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	COMMD9	Q9P000	198 aa		10.13	□□□□□ -0.79
RNF31-223	ENST00000560754	KIR2DL5B	A0A0G2JN68	375 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	KIR2DL5B	A0A0G2JPC4	375 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	NDUFA4	O00483	81 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	CYB5B	O43169	146 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	XRCC3	O43542	346 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	SPRY2	O43597	315 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	PGLYRP1	O75594	196 aa	Predicted RBP	10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	S1PR2	O95136	353 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	BMI1	P35226	326 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	ADM	P35318	185 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	FXYD4	P59646	89 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	SLC25A24	Q6NUK1	477 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	KIR2DL5A	Q8N109	375 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	DMBX1	Q8NFW5	382 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	OR1L8	Q8NGR8	309 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	OR51H1	Q8NH63	302 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	KIR2DL5B	Q8NHK3	375 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	SCARB1	Q8WTV0	552 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	RNF183	Q96D59	192 aa		10.12	□□□□□ -0.79
RNF31-223	ENST00000560754	DAZ1	Q9NQZ3	744 aa	Known RBP	10.12	□□□□□ -0.79
RNF31-223	ENST00000560754		A0A0J9YWU9	116 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	OR2T8	A6NH00	312 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754		F8W735	103 aa	Predicted RBP	10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	CTSG	P08311	255 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	NAT1	P18440	290 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	RFX2	P48378	723 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	APOC4	P55056	127 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	LAMTOR1	Q6IAA8	161 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	FCAMR	Q8WWV6	532 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	S100A16	Q96FQ6	103 aa	Known RBP	10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	ZNF414	Q96IQ9	312 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	CHRDL1	Q9BU40	450 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	ANAPC10	Q9UM13	185 aa		10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	F11R	Q9Y624	299 aa	Known RBP	10.11	□□□□□ -0.79
RNF31-223	ENST00000560754	MARCH11	A6NNE9	402 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	FCER2	P06734	321 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	RPA2	P15927	270 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	LPAR6	P43657	344 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	ODF3L2	Q3SX64	289 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	AADACL3	Q5VUY0	350 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	LYG2	Q86SG7	212 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	TMEM17	Q86X19	198 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	LYSMD2	Q8IV50	215 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	MOB3A	Q96BX8	217 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	DGCR14	Q96DF8	476 aa	Known RBP	10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	C21orf62	Q9NYP8	219 aa		10.1	□□□□□ -0.79
RNF31-223	ENST00000560754	LOC100506127	A0A0U1RQW1	187 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	MEIS3P1	A6NDR6	274 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	NUPR2	A6NF83	97 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	C15orf62	A8K5M9	175 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754		K7EIM0	57 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	KRAS	P01116	189 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	ERVK-16	P61578	105 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	CROCCP3	Q8IVE0	287 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	STPG3	Q8N7X2	389 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	LSM10	Q969L4	123 aa	Known RBP	10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	GALNT14	Q96FL9	552 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	FKBP11	Q9NYL4	201 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	EHF	Q9NZC4	300 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	UBQLN2	Q9UHD9	624 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	SMPX	Q9UHP9	88 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	OR51B2	Q9Y5P1	312 aa		10.09	□□□□□ -0.79
RNF31-223	ENST00000560754	CXorf65	A6NEN9	183 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	LY6G6C	O95867	125 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	FCGR2B	P31994	310 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	HERV-K104	P61576	105 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	DEFB135	Q30KP9	77 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	OR5B3	Q8NH48	314 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	OR10C1	Q96KK4	312 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-223	ENST00000560754		Q9H521	79 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms