RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 FBN3Q75N90 2809 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 VWFP04275 2813 aa6.21□□□□□ -1.41
LRRC28-219ENST00000560483 IGHV4OR15-8A0A075B7B6 117 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 A0A087WW49 117 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 TRAV3A0A0B4J244 114 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 C3orf85A0A1B0GTC6 90 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 SEC14L6B5MCN3 397 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 H3BUA1 57 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 UPK2O00526 184 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 CYB5BO43169 146 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 GSTZ1O43708 216 aaPredicted RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 OR2J3O76001 311 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 DUS4LO95620 317 aaKnown RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 LY86O95711 162 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 CD74P04233 296 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 LGALS1P09382 135 aaKnown RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 AKR1C4P17516 323 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 HOXD3P31249 432 aaPredicted RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 CRIP2P52943 208 aaPredicted RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 SLURP1P55000 103 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 UCP3P55916 312 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 BRWD1-AS2P59051 145 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 RHOGP84095 191 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 SP6Q3SY56 376 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 TMED4Q7Z7H5 227 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 PUSL1Q8N0Z8 303 aaKnown RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 LINC00482Q8N8I6 264 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 MRGPRFQ96AM1 343 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 RRNAD1Q96FB5 475 aaKnown RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 TSC22D3Q99576 134 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 RBM38Q9H0Z9 239 aaKnown RBP6.21□□□□□ -1.42
LRRC28-219ENST00000560483 ENY2Q9NPA8 101 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 OR51B2Q9Y5P1 312 aa6.21□□□□□ -1.42
LRRC28-219ENST00000560483 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 CENPXA8MT69 81 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 H0Y980 276 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 SAP30O75446 220 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 IFNA17P01571 189 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 IGHV3-23P01764 117 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 HSPB1P04792 205 aaKnown RBP6.2□□□□□ -1.42
LRRC28-219ENST00000560483 CTSDP07339 412 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-219ENST00000560483 TRAPPC2P0DI81 140 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 TRAPPC2BP0DI82 140 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 SSBP2P81877 361 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-219ENST00000560483 EXOSC2Q13868 293 aaKnown RBP6.2□□□□□ -1.42
LRRC28-219ENST00000560483 RPEL1Q2QD12 228 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 ASPHD1Q5U4P2 390 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 SLC25A24Q6NUK1 477 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 ETV3LQ6ZN32 361 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 SGPP2Q8IWX5 399 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 RNF152Q8N8N0 203 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 OR1L8Q8NGR8 309 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 USMG5Q96IX5 58 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 TMEM56Q96MV1 263 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 QTRT1Q9BXR0 403 aaKnown RBP6.2□□□□□ -1.42
LRRC28-219ENST00000560483 RANGRFQ9HD47 186 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-219ENST00000560483 FKBP11Q9NYL4 201 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 FBXL7Q9UJT9 491 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 PRNDQ9UKY0 176 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF257Q9Y2Q1 563 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 KCNIP3Q9Y2W7 256 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 S4R3C0 116 aa6.2□□□□□ -1.42
LRRC28-219ENST00000560483 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 I3L521 148 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 OVOL1O14753 267 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 IL6RP08887 468 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-219ENST00000560483 OR5AC1P0C628 307 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 OR13C7P0DN81 318 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 ANXA3P12429 323 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 AREGP15514 252 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 ZP3P21754 424 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 PSMB6P28072 239 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 HOXA1P49639 335 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-219ENST00000560483 RND3P61587 244 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 TATDN3Q17R31 274 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 C15orf32Q32M92 178 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 C19orf54Q5BKX5 351 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 SPINK9Q5DT21 86 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 DEFB121Q5J5C9 76 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 C19orf35Q6ZS72 473 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 LHFPL1Q86WI0 220 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 FAM223AQ8IWN6 122 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 TTC9CQ8N5M4 171 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 SLC35G3Q8N808 338 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 ADAD2Q8NCV1 583 aaKnown RBP6.19□□□□□ -1.42
LRRC28-219ENST00000560483 OR6Q1Q8NGQ2 317 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 MRAPQ8TCY5 172 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 DCUN1D4Q92564 292 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 OR4C12Q96R67 309 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 TP53RKQ96S44 253 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 P2RX4Q99571 388 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 ELOVL1Q9BW60 279 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 NAA60Q9H7X0 242 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 AKIP1Q9NQ31 210 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 THYN1Q9P016 225 aa6.19□□□□□ -1.42
LRRC28-219ENST00000560483 PEF1Q9UBV8 284 aaKnown RBP6.19□□□□□ -1.42
LRRC28-219ENST00000560483 ZMAT5Q9UDW3 170 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms