RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 H0YJW9 148 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 AP4M1O00189 453 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 DVL1O14640 695 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 PPP1R2P9O14990 202 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 CLN5O75503 358 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 MMP23AO75900 390 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 YIF1AO95070 293 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 CA2P00918 260 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 FBP1P09467 338 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 LOXP28300 417 aaPredicted RBP7.91□□□□□ -1.14
RTF1-206ENST00000560447 LGALS7P47929 136 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 ERHP84090 104 aaKnown RBP7.91□□□□□ -1.14
RTF1-206ENST00000560447 SPINK9Q5DT21 86 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 TGIF2LYQ8IUE0 185 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 VKORC1L1Q8N0U8 176 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 ABHD12Q8N2K0 398 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 C8orf46Q8TAG6 207 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 LEAP2Q969E1 77 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 ST6GALNAC6Q969X2 333 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 FLYWCH2Q96CP2 140 aaKnown RBP7.91□□□□□ -1.14
RTF1-206ENST00000560447 HARBI1Q96MB7 349 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 NABP2Q9BQ15 211 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 DCAF16Q9NXF7 216 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 WASHC3Q9Y3C0 194 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 FRYQ5TBA9 3013 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 DMXL1Q9Y485 3027 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 YLPM1P49750 1951 aaKnown RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 hCG_1809904A0A1W2PP81 198 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PPE3 182 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PR64 198 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PRV1 198 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 C11orf94C9JXX5 98 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 DLL1O00548 723 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 SMIM6P0DI80 62 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 SAA1P0DJI8 122 aaPredicted RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 SFTPCP11686 197 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 AREGP15514 252 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 S100PP25815 95 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 RPS10P46783 165 aaKnown RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 SUB1P53999 127 aaKnown RBP eCLIP7.9□□□□□ -1.14
RTF1-206ENST00000560447 B2MP61769 119 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 RPL8P62917 257 aaKnown RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 S100A12P80511 92 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 PAX2Q02962 417 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 VMA21Q3ZAQ7 101 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 PRR30Q53SZ7 412 aaPredicted RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 OR10X1Q8NGY0 326 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 OR4F5Q8NH21 305 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 Q8WTZ3 238 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 CCL17Q92583 94 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 OR4F4Q96R69 305 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 IMMP2LQ96T52 175 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 MRPL20Q9BYC9 149 aaKnown RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 COMMD5Q9GZQ3 224 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 PARLQ9H300 379 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 NDUFA4L2Q9NRX3 87 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 SH3BGRL2Q9UJC5 107 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 RALYQ9UKM9 306 aaKnown RBP7.9□□□□□ -1.14
RTF1-206ENST00000560447 LY96Q9Y6Y9 160 aa7.9□□□□□ -1.14
RTF1-206ENST00000560447 ZFHX2Q9C0A1 2572 aaPredicted RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 ZNF98A6NK75 572 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 PAGE4O60829 102 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 IGHV3-7P01780 117 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 FAM87AP0C7U9 286 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 IGHV1-8P0DP01 117 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 RNASE2P10153 161 aaKnown RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 SRP14P37108 136 aaKnown RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 COMPP49747 757 aaPredicted RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 PRRX1P54821 245 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 RPL23P62829 140 aaKnown RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 CD69Q07108 199 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 HLA-DRB5Q30154 266 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 UTF1Q5T230 341 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 SPNS3Q6ZMD2 512 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 TGIF2LXQ8IUE1 241 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 STPG3Q8N7X2 389 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 TEX45Q8NA69 505 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 BEND2Q8NDZ0 799 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 H1FXQ92522 213 aaKnown RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 C11orf52Q96A22 123 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 C1orf159Q96HA4 380 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 OR5B12Q96R08 314 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 RNF5Q99942 180 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 MRPL32Q9BYC8 188 aaKnown RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 TMEM133Q9H2Q1 129 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 CTSZQ9UBR2 303 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 SLC45A2Q9UMX9 530 aa7.89□□□□□ -1.15
RTF1-206ENST00000560447 AMMECR1Q9Y4X0 333 aaPredicted RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 ANKRD11Q6UB99 2663 aaPredicted RBP7.89□□□□□ -1.15
RTF1-206ENST00000560447 AKAP13Q12802 2813 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ARFGEF3Q5TH69 2177 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ACACAQ13085 2346 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ELOA3CA0A087WX78 387 aaPredicted RBP7.88□□□□□ -1.15
RTF1-206ENST00000560447 SRRM4A7MD48 611 aaKnown RBP7.88□□□□□ -1.15
RTF1-206ENST00000560447 H7BYZ3 331 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 FCN3O75636 299 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 IGHV2-70P01814 119 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms