RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 OR2S2Q9NQN1 319 aa10.63□□□□□ -0.71
SMAD3-214ENST00000560402 GNG12Q9UBI6 72 aa10.63□□□□□ -0.71
SMAD3-214ENST00000560402 NSG2Q9Y328 171 aa10.63□□□□□ -0.71
SMAD3-214ENST00000560402 NBEAL2Q6ZNJ1 2754 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 IGHV3-43A0A0B4J1X8 118 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 TAAR5O14804 337 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 ST8SIA3O43173 380 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 SCGB1D2O95969 90 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 IGF1P05019 195 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 OR8U9P0C7N5 309 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 IGHV3-43DP0DP04 118 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 CFHR3Q02985 330 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 RAB32Q13637 225 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
SMAD3-214ENST00000560402 SLC35G3Q8N808 338 aa10.62□□□□□ -0.71
SMAD3-214ENST00000560402 LINC01548A6NM66 108 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 K7EPK0 472 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 WRBO00258 174 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 SLC25A6P12236 298 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 FHL3Q13643 280 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 EIF5AL1Q6IS14 154 aaKnown RBP10.61□□□□□ -0.71
SMAD3-214ENST00000560402 ZNF66Q6ZN08 573 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 LYZL2Q7Z4W2 148 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 SELENOHQ8IZQ5 122 aaKnown RBP10.61□□□□□ -0.71
SMAD3-214ENST00000560402 OR51H1Q8NH63 302 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 UBALD1Q8TB05 177 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 SCARB1Q8WTV0 552 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 RRNAD1Q96FB5 475 aaKnown RBP10.61□□□□□ -0.71
SMAD3-214ENST00000560402 PHYHIPLQ96FC7 376 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 AQP10Q96PS8 301 aa10.61□□□□□ -0.71
SMAD3-214ENST00000560402 ZNF471Q9BX82 626 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-214ENST00000560402 FAM212BQ9NTI7 297 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-214ENST00000560402 LSM5Q9Y4Y9 91 aaKnown RBP10.61□□□□□ -0.71
SMAD3-214ENST00000560402 RYR3Q15413 4870 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 ITGB1BP1O14713 200 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 SLC31A2O15432 143 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 TNFSF12O43508 249 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 DEDDO75618 318 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 TPT1P13693 172 aaKnown RBP10.6□□□□□ -0.71
SMAD3-214ENST00000560402 PSMB8P28062 276 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 AKR1C2P52895 323 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 VAMP2P63027 116 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 IL15RAQ13261 267 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 MMDQ15546 238 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 CLLU1Q5K131 121 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 OR52L2PQ8NGH6 319 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 HSD17B10Q99714 261 aaKnown RBP10.6□□□□□ -0.71
SMAD3-214ENST00000560402 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
SMAD3-214ENST00000560402 A0A1B0GU03 582 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 RNF222A6NCQ9 220 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 MPTX1A8MV57 137 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 SEC14L6B5MCN3 397 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 YPEL1O60688 119 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 NKX2-1P43699 371 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-214ENST00000560402 INSL3P51460 131 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 DEFB136Q30KP8 78 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 CT45A1Q5HYN5 189 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 FAM219AQ8IW50 185 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 OR1S1Q8NH92 325 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 CT45A3Q8NHU0 189 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 LRRC20Q8TCA0 184 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 CD300LFQ8TDQ1 290 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 ST8SIA2Q92186 375 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 LSM10Q969L4 123 aaKnown RBP10.59□□□□□ -0.71
SMAD3-214ENST00000560402 YPEL2Q96QA6 119 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 ABHD14AQ9BUJ0 271 aa10.59□□□□□ -0.71
SMAD3-214ENST00000560402 SPDEFO95238 335 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 HLA-DRB1P01911 266 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 OR8U8P0C7N1 319 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 RPL12P30050 165 aaKnown RBP10.58□□□□□ -0.72
SMAD3-214ENST00000560402 PPP1CCP36873 323 aaKnown RBP10.58□□□□□ -0.72
SMAD3-214ENST00000560402 KIR2DS2P43631 304 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 P2RY1P47900 373 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF134P52741 427 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 RUNX1Q01196 453 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 FAM53AQ6NSI3 398 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-214ENST00000560402 FAM71F2Q6NXP2 309 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 TCTEX1D2Q8WW35 142 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 UBE2E2Q96LR5 201 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 RNF126Q9BV68 326 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 SLC25A31Q9H0C2 315 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 OR5AC2Q9NZP5 309 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
SMAD3-214ENST00000560402 U3KQK5 164 aa10.58□□□□□ -0.72
SMAD3-214ENST00000560402 BORCS7-ASMTA0A0B4J1R7 106 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 MBPP02686 304 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-214ENST00000560402 F2RL1P55085 397 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 MORN2Q502X0 79 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 NMSQ5H8A3 153 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 C5orf24Q7Z6I8 188 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-214ENST00000560402 OR4D5Q8NGN0 318 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 STOML3Q8TAV4 291 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF251Q9BRH9 671 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms