RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KISS1Q15726 138 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 CLEC6AQ6EIG7 209 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 TNFAIP8L2Q6P589 184 aaPredicted RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 UPF3BQ9BZI7 483 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 CHMP4BQ9H444 224 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 IMP3Q9NV31 184 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 OR5AC2Q9NZP5 309 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 C15orf41Q9Y2V0 281 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 TTC21AQ8NDW8 1320 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 EXPH5Q8NEV8 1989 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 TRBV6-7A0A0A0MS04 114 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 DISC1C4P0D8 188 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 SHBGP04278 402 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 TYMSP04818 313 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 FGF6P10767 208 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 RPS4Y1P22090 263 aaKnown RBP0.33□□□□□ -2.36
CASC4-210ENST00000559550 ZNF80P51504 273 aaPredicted RBP0.33□□□□□ -2.36
CASC4-210ENST00000559550 RSU1Q15404 277 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 CST9Q5W186 159 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 COMMD7Q86VX2 200 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 Q8N402 240 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 OR4C6Q8NH72 309 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 MAP1LC3AQ9H492 121 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 PLEKHJ1Q9NW61 149 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 IL36BQ9NZH7 164 aa0.33□□□□□ -2.36
CASC4-210ENST00000559550 C21orf140B9A014 251 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 CALUO43852 315 aaPredicted RBP0.32□□□□□ -2.36
CASC4-210ENST00000559550 NOS1APO75052 506 aaPredicted RBP0.32□□□□□ -2.36
CASC4-210ENST00000559550 YEATS4O95619 227 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 C1QAP02745 245 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 NFYAP23511 347 aaPredicted RBP0.32□□□□□ -2.36
CASC4-210ENST00000559550 MAP3K7CLP57077 242 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 FABP9Q0Z7S8 132 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 SYPL2Q5VXT5 272 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 LCN15Q6UWW0 184 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 ZNF550Q7Z398 422 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 SLC51BQ86UW2 128 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 MRPL57Q9BQC6 102 aaKnown RBP0.32□□□□□ -2.36
CASC4-210ENST00000559550 FKBP14Q9NWM8 211 aa0.32□□□□□ -2.36
CASC4-210ENST00000559550 EIF4G1Q04637 1599 aaKnown RBP0.32□□□□□ -2.36
CASC4-210ENST00000559550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.31□□□□□ -2.36
CASC4-210ENST00000559550 LOC110117498A0A087WWA1 95 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 A0A087WX48 190 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 EVPLLA8MZ36 301 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 GOLGA8KD6RF30 607 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 GOLGA8MH3BSY2 632 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 OCMP0CE72 109 aaPredicted RBP0.31□□□□□ -2.36
CASC4-210ENST00000559550 RPL12P30050 165 aaKnown RBP0.31□□□□□ -2.36
CASC4-210ENST00000559550 SKP1P63208 163 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 WFDC11Q8NEX6 87 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 C11orf40Q8WZ69 217 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 OR51I2Q9H344 312 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 EFCAB1Q9HAE3 211 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 CISHQ9NSE2 258 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 ZFP30Q9Y2G7 519 aa0.31□□□□□ -2.36
CASC4-210ENST00000559550 TNRC6BQ9UPQ9 1833 aaKnown RBP0.31□□□□□ -2.36
CASC4-210ENST00000559550 COL4A5P29400 1685 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 IGKV1D-42A0A075B6H8 117 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 FABP5P3A8MUU1 101 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 FAM25EA8MYX2 175 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 PFDN6O15212 129 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 KCNE1P15382 129 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 ZNF93P35789 620 aaPredicted RBP0.3□□□□□ -2.36
CASC4-210ENST00000559550 CD151P48509 253 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 AAED1Q7RTV5 226 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 DEFB125Q8N687 156 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 ROPN1LQ96C74 230 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 CMTM5Q96DZ9 223 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 DIRAS2Q96HU8 199 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 HDHD2Q9H0R4 259 aa0.3□□□□□ -2.36
CASC4-210ENST00000559550 A0A0J9YY10 115 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 A0A1B0GX78 115 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 INMT-MINDY4F8WBC2 141 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 SSNA1O43805 119 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 FADS1O60427 444 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 PRM2P04554 102 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 COX5BP10606 129 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 FKBP2P26885 142 aaKnown RBP0.29□□□□□ -2.36
CASC4-210ENST00000559550 DMTNQ08495 405 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 MLLT11Q13015 90 aaPredicted RBP0.29□□□□□ -2.36
CASC4-210ENST00000559550 GUK1Q16774 197 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 IBA57Q5T440 356 aaKnown RBP0.29□□□□□ -2.36
CASC4-210ENST00000559550 C1orf195Q5TG92 126 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 Q6ZQT0 140 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 PLEKHG7Q6ZR37 379 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 ZNF826PQ6ZT77 177 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 LAMA4Q16363 1823 aa0.29□□□□□ -2.36
CASC4-210ENST00000559550 MAST2Q6P0Q8 1798 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 C2orf70A6NJV1 201 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 CTSDP07339 412 aaPredicted RBP0.28□□□□□ -2.36
CASC4-210ENST00000559550 ASAH2BP0C7U1 165 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 CRYGAP11844 174 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 BLVRAP53004 296 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 CCL20P78556 96 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 GLT8D1Q68CQ7 371 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 TMEM106AQ96A25 262 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 ATP6V1G3Q96LB4 118 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms