RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 NDUFB3O43676 98 aa9□□□□□ -0.97
SPG11-217ENST00000559511 SAA1P0DJI8 122 aaPredicted RBP9□□□□□ -0.97
SPG11-217ENST00000559511 APOBEC3AP31941 199 aaPredicted RBP9□□□□□ -0.97
SPG11-217ENST00000559511 REG1BP48304 166 aa9□□□□□ -0.97
SPG11-217ENST00000559511 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
SPG11-217ENST00000559511 ADIRFQ15847 76 aa9□□□□□ -0.97
SPG11-217ENST00000559511 RAB1CQ92928 201 aa9□□□□□ -0.97
SPG11-217ENST00000559511 NPVFQ9HCQ7 196 aa9□□□□□ -0.97
SPG11-217ENST00000559511 PRNDQ9UKY0 176 aa9□□□□□ -0.97
SPG11-217ENST00000559511 ITPR1Q14643 2758 aa9□□□□□ -0.97
SPG11-217ENST00000559511 A0A1W2PPV4 95 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 COL8A2P25067 703 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 LOXP28300 417 aaPredicted RBP8.99□□□□□ -0.97
SPG11-217ENST00000559511 RND2P52198 227 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 PRCDQ00LT1 54 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 DIAPH2-AS1Q14236 149 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 TMEM241Q24JQ0 296 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 LRRC10Q5BKY1 277 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 C12orf57Q99622 126 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 PLEKHA3Q9HB20 300 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 METTL1Q9UBP6 276 aaKnown RBP8.99□□□□□ -0.97
SPG11-217ENST00000559511 ZNF257Q9Y2Q1 563 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 ANKHD1Q8IWZ3 2542 aaKnown RBP8.99□□□□□ -0.97
SPG11-217ENST00000559511 HRNRQ86YZ3 2850 aaPredicted RBP8.99□□□□□ -0.97
SPG11-217ENST00000559511 TEX50A0A1B0GTY4 177 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 H0YJW9 148 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 CLDN34H7C241 214 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 SOX15O60248 233 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 ARL14EPLP0DKL9 152 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 NPPCP23582 126 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 DLX6P56179 175 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 UBE2G2P60604 165 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 RPL23P62829 140 aaKnown RBP8.99□□□□□ -0.97
SPG11-217ENST00000559511 EFNB3Q15768 340 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 TMEM249Q2WGJ8 235 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 BET1LQ9NYM9 111 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 HIVEP3Q5T1R4 2406 aa8.99□□□□□ -0.97
SPG11-217ENST00000559511 CACNA1AO00555 2505 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 B9A039 149 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 ATP5G3P48201 142 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 B2MP61769 119 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 TEPPQ6URK8 271 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 STPG3Q8N7X2 389 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 OR5AN1Q8NGI8 311 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 OR51G1Q8NGK1 321 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 ABHD5Q8WTS1 349 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 NEIL1Q96FI4 390 aaPredicted RBP8.98□□□□□ -0.97
SPG11-217ENST00000559511 HARBI1Q96MB7 349 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 ZMAT5Q9UDW3 170 aaKnown RBP8.98□□□□□ -0.97
SPG11-217ENST00000559511 ABCA4P78363 2273 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 IGHV1-69-2A0A0G2JMI3 117 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 AP4M1O00189 453 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 NDUFS6O75380 124 aaKnown RBP8.98□□□□□ -0.97
SPG11-217ENST00000559511 APOA2P02652 100 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 STAG3L2P0CL84 134 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 STAG3L3P0CL85 134 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 SFTPCP11686 197 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 MEOX2P50222 304 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 KIAA0141Q14154 515 aaPredicted RBP8.98□□□□□ -0.97
SPG11-217ENST00000559511 MOB3BQ86TA1 216 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 OR10W1Q8NGF6 305 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 OR10X1Q8NGY0 326 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 OSR1Q8TAX0 266 aaPredicted RBP8.98□□□□□ -0.97
SPG11-217ENST00000559511 CTDSP1Q9GZU7 261 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 KAAG1Q9UBP8 84 aa8.98□□□□□ -0.97
SPG11-217ENST00000559511 PLXNB1O43157 2135 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 NAV3Q8IVL0 2385 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 PCP4L1A6NKN8 68 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 IGFBP2P18065 325 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 BSXQ3C1V8 233 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 TMEM155Q4W5P6 130 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 SPATA31B1PQ5VZV4 182 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 CST9LP1Q5W188 147 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 SPNS3Q6ZMD2 512 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 C16orf82Q7Z2V1 217 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 ZNF596Q8TC21 504 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 FAM210BQ96KR6 192 aa8.97□□□□□ -0.97
SPG11-217ENST00000559511 SEPSECSQ9HD40 501 aaKnown RBP8.97□□□□□ -0.97
SPG11-217ENST00000559511 E7EUB6 86 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 LYNX1G3V0Z9 82 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 TRGC2P03986 189 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 LYNX1P0DP58 116 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 GNB1P62873 340 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 TMEM177Q53S58 311 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 C11orf42Q8N5U0 333 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 LINC00311Q8N616 119 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 OR5B3Q8NH48 314 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 ST6GALNAC6Q969X2 333 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 NABP2Q9BQ15 211 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 KCNIP2Q9NS61 270 aa8.96□□□□□ -0.97
SPG11-217ENST00000559511 IGKV1OR2-108A0A075B7D4 117 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 CXorf1O96002 111 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 RNASE2P10153 161 aaKnown RBP8.96□□□□□ -0.98
SPG11-217ENST00000559511 RPL29P47914 159 aaKnown RBP8.96□□□□□ -0.98
SPG11-217ENST00000559511 PRR20EP86478 221 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 PRR20CP86479 221 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 PRR20DP86480 221 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 PRR20BP86481 221 aa8.96□□□□□ -0.98
SPG11-217ENST00000559511 PRR20AP86496 221 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms