RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 A0A1B0GUS0 222 aa6□□□□□ -1.45
USP3-210ENST00000559192 CELA3AP09093 270 aa6□□□□□ -1.45
USP3-210ENST00000559192 CFHR1Q03591 330 aa6□□□□□ -1.45
USP3-210ENST00000559192 PRSS8Q16651 343 aa6□□□□□ -1.45
USP3-210ENST00000559192 TMEM249Q2WGJ8 235 aa6□□□□□ -1.45
USP3-210ENST00000559192 ACTL10Q5JWF8 245 aa6□□□□□ -1.45
USP3-210ENST00000559192 ZNF324BQ6AW86 544 aaPredicted RBP6□□□□□ -1.45
USP3-210ENST00000559192 UNQ6494/PRO21346Q6UXR6 183 aa6□□□□□ -1.45
USP3-210ENST00000559192 PERPQ96FX8 193 aa6□□□□□ -1.45
USP3-210ENST00000559192 TMEM242Q9NWH2 141 aa6□□□□□ -1.45
USP3-210ENST00000559192 IL36BQ9NZH7 164 aa6□□□□□ -1.45
USP3-210ENST00000559192 ANAPC10Q9UM13 185 aa6□□□□□ -1.45
USP3-210ENST00000559192 SH2D7A6NKC9 451 aaPredicted RBP6□□□□□ -1.45
USP3-210ENST00000559192 RRHO14718 337 aa6□□□□□ -1.45
USP3-210ENST00000559192 NAPSAO96009 420 aa6□□□□□ -1.45
USP3-210ENST00000559192 CGAP01215 116 aa6□□□□□ -1.45
USP3-210ENST00000559192 CKS2P33552 79 aa6□□□□□ -1.45
USP3-210ENST00000559192 RPL31P62899 125 aaKnown RBP6□□□□□ -1.45
USP3-210ENST00000559192 LHFPL4Q7Z7J7 247 aa6□□□□□ -1.45
USP3-210ENST00000559192 DNASE2BQ8WZ79 361 aa6□□□□□ -1.45
USP3-210ENST00000559192 SNRNP40Q96DI7 357 aaKnown RBP6□□□□□ -1.45
USP3-210ENST00000559192 FOXC2Q99958 501 aa6□□□□□ -1.45
USP3-210ENST00000559192 ZPBPQ9BS86 351 aa6□□□□□ -1.45
USP3-210ENST00000559192 C2orf88Q9BSF0 95 aa6□□□□□ -1.45
USP3-210ENST00000559192 J3QR06 171 aa6□□□□□ -1.45
USP3-210ENST00000559192 CRYGSP22914 178 aa6□□□□□ -1.45
USP3-210ENST00000559192 REG1BP48304 166 aa6□□□□□ -1.45
USP3-210ENST00000559192 TRA2AQ13595 282 aaKnown RBP eCLIP6□□□□□ -1.45
USP3-210ENST00000559192 RPL39P5Q59GN2 51 aa6□□□□□ -1.45
USP3-210ENST00000559192 KHDC1LQ5JSQ8 128 aa6□□□□□ -1.45
USP3-210ENST00000559192 PRR31Q5SQ13 230 aa6□□□□□ -1.45
USP3-210ENST00000559192 OR2K2Q8NGT1 345 aa6□□□□□ -1.45
USP3-210ENST00000559192 C1QTNF5Q9BXJ0 243 aa6□□□□□ -1.45
USP3-210ENST00000559192 DEPPQ9NTK1 212 aa6□□□□□ -1.45
USP3-210ENST00000559192 OR11H12B2RN74 326 aa6□□□□□ -1.45
USP3-210ENST00000559192 IL6RP08887 468 aaPredicted RBP6□□□□□ -1.45
USP3-210ENST00000559192 PTGDSP41222 190 aa6□□□□□ -1.45
USP3-210ENST00000559192 NMSQ5H8A3 153 aa6□□□□□ -1.45
USP3-210ENST00000559192 FBXW9Q5XUX1 488 aa6□□□□□ -1.45
USP3-210ENST00000559192 TDHQ8IZJ6 230 aa6□□□□□ -1.45
USP3-210ENST00000559192 OR11H1Q8NG94 326 aa6□□□□□ -1.45
USP3-210ENST00000559192 OR11H2Q8NH07 326 aa6□□□□□ -1.45
USP3-210ENST00000559192 TMEM186Q96B77 213 aa6□□□□□ -1.45
USP3-210ENST00000559192 PRDM13Q9H4Q3 707 aa6□□□□□ -1.45
USP3-210ENST00000559192 MPDZO75970 2070 aa6□□□□□ -1.45
USP3-210ENST00000559192 KIAA1549LQ6ZVL6 1849 aa6□□□□□ -1.45
USP3-210ENST00000559192 TRAV24A0A0B4J272 114 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 PPIHO43447 177 aaKnown RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 PRDX2P32119 198 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 GPR183P32249 361 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 STXBP6Q8NFX7 210 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 MS4A5Q9H3V2 200 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 RAXQ9Y2V3 346 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 TRBV9A0A0B4J1U6 114 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 CEACAM18A8MTB9 384 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 A8MWP6 167 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 LINC00869P0C866 280 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 ANOS1P23352 680 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 GPR6P46095 362 aaPredicted RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 ARRDC1-AS1Q9H2J1 176 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 C12orf77C9JDV5 145 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 FCGR2BP31994 310 aaPredicted RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 UCP2P55851 309 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 BHLHA15Q7RTS1 189 aaPredicted RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 ZIC4Q8N9L1 334 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 ZNF48Q96MX3 618 aaPredicted RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 PAXXQ9BUH6 204 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 RNASE7Q9H1E1 156 aaKnown RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 DENND4AQ7Z401 1863 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 MPDU1O75352 247 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 GOSR1O95249 250 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 FTH1P19P0C7X4 201 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 MMDQ15546 238 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 SPANXN1Q5VSR9 72 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 TEX38Q6PEX7 206 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 WFDC8Q8IUA0 241 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 UBALD2Q8IYN6 164 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 MAFAQ8NHW3 353 aaPredicted RBP5.99□□□□□ -1.45
USP3-210ENST00000559192 COPS9Q8WXC6 57 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 SPSB4Q96A44 273 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 DCTN5Q9BTE1 182 aa5.99□□□□□ -1.45
USP3-210ENST00000559192 TRAV8-4A0A0B4J246 113 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 A0A1W2PRD5 423 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 A0A1W2PRF3 423 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 A0A1W2PRM7 423 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 M0QZ24 198 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 IGHV3-48P01763 117 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 MRPL52Q86TS9 123 aaKnown RBP5.98□□□□□ -1.45
USP3-210ENST00000559192 ZNF414Q96IQ9 312 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 PGLYRP4Q96LB8 373 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 EGLN1Q9GZT9 426 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 TMEM106BQ9NUM4 274 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 BRWD1Q9NSI6 2320 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 H3BTX0 84 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 J3KRW8 73 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 ACP1P24666 158 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 C2orf83Q53S99 150 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 ZNF788Q6ZQV5 615 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 PRNTQ86SH4 94 aa5.98□□□□□ -1.45
USP3-210ENST00000559192 RPP25LQ8N5L8 163 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms