RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 GZMHP20718 246 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CCNOP22674 350 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 SRP14P37108 136 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 LGALS7P47929 136 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 FXYD6P3P58550 94 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TPPP2P59282 170 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TAS2R41P59536 307 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 YPEL3P61236 119 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ERVS71-1P61550 626 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 MEF2BQ02080 365 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF92Q03936 586 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ENDOGQ14249 297 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ARL6IP1Q15041 203 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 LRRC10Q5BKY1 277 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CLEC12AQ5QGZ9 265 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 VAX1Q5SQQ9 334 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 PHYHD1Q5SRE7 291 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TPTE2P1Q5T6R2 138 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 PRAMEF20Q5VT98 475 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 PVRIGQ6DKI7 326 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 SLC8B1Q6J4K2 584 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 KCNIP4Q6PIL6 250 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 BRD3OSQ6XYD6 125 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 DEFB128Q7Z7B8 93 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 SGPP2Q8IWX5 399 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 NRMQ8IXM6 262 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 SLC35F2Q8IXU6 374 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM156Q8N614 296 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR51D1Q8NGF3 324 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR51L1Q8NGJ5 315 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR8S1Q8NH09 359 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR5K2Q8NHB8 316 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CLDND2Q8NHS1 167 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF563Q8TA94 476 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 GPR119Q8TDV5 335 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ABHD3Q8WU67 409 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM239Q8WW34 195 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 UBE2E3Q969T4 207 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 MRGPRFQ96AM1 343 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 FAM3DQ96BQ1 224 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 SLAMF6Q96DU3 332 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZMYND19Q96E35 227 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 REEP6Q96HR9 211 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ABHD14BQ96IU4 210 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR2V2Q96R30 315 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR7D2Q96RA2 312 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 MED10Q9BTT4 135 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 EFCAB11Q9BUY7 163 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR52D1Q9H346 318 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CALHM2Q9HA72 323 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM9BQ9NQ34 198 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 PRSS16Q9NQE7 514 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 GPR84Q9NQS5 396 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 AHSPQ9NZD4 102 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 C14orf166Q9Y224 244 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 LAMTOR2Q9Y2Q5 125 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 RBM7Q9Y580 266 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 MRPS18BQ9Y676 258 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 KIAA1671Q9BY89 1806 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 COL5A3P25940 1745 aaPredicted RBP2□□□□□ -2.09
VPS13C-208ENST00000559119 TRAV9-1A0A075B6T8 112 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 IGHV2-26A0A0B4J1V2 119 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 CXorf51AA0A1B0GTR3 108 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 A0A1W2PRS3 328 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 IGLC7A0M8Q6 106 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 VSTM2BA6NLU5 285 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 HIDE1A8MVS5 230 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 CDC42EP2O14613 210 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 HCRTO43612 131 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 HYPMO75409 117 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 UPK3AO75631 287 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 B3GAT3O94766 335 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 VAMP5O95183 116 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 ETHE1O95571 254 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 CD160O95971 181 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 HRASP01112 189 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 IGLV3-27P01718 113 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 CSN2P05814 226 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 OR10J4P0C629 311 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 PIRTP0C851 137 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 IGLC2P0DOY2 106 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 IGLC3P0DOY3 106 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 PNMTP11086 282 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 CD99P14209 185 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF43P17038 809 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 AKR1C4P17516 323 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 CSNK2A2P19784 350 aaPredicted RBP2□□□□□ -2.09
VPS13C-208ENST00000559119 PPP1CCP36873 323 aaKnown RBP2□□□□□ -2.09
VPS13C-208ENST00000559119 RPL13AP40429 203 aaKnown RBP2□□□□□ -2.09
VPS13C-208ENST00000559119 GABRA2P47869 451 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 EFNB2P52799 333 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 ARG2P78540 354 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 Q0VG73 95 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 FZD2Q14332 565 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF266Q14584 549 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 MMDQ15546 238 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 SLC9A3R2Q15599 337 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 TP53I3Q53FA7 332 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 C1orf100Q5SVJ3 147 aa2□□□□□ -2.09
VPS13C-208ENST00000559119 LDLRAD2Q5SZI1 272 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms