RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 OR2B8PP59922 312 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 SPANXN2Q5MJ10 180 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 CTRB2Q6GPI1 263 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 OR1L6Q8NGR2 347 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 OR5B3Q8NH48 314 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 OR4A16Q8NH70 328 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 DLX4Q92988 240 aaPredicted RBP6.54□□□□□ -1.36
TPM1-213ENST00000558400 TMEM56Q96MV1 263 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 OR4C12Q96R67 309 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 RBM38Q9H0Z9 239 aaKnown RBP6.54□□□□□ -1.36
TPM1-213ENST00000558400 AKIP1Q9NQ31 210 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 BATF3Q9NR55 127 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 KCNIP3Q9Y2W7 256 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 IGHV4OR15-8A0A075B7B6 117 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 A0A087WW49 117 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 PIGBOS1A0A0B4J2F0 54 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 TEX50A0A1B0GTY4 177 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 ANKRD34BA5PLL1 514 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 A6NHS1 94 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 E7EUB6 86 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 H0Y980 276 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 HOXD3P31249 432 aaPredicted RBP6.53□□□□□ -1.36
TPM1-213ENST00000558400 ETV6P41212 452 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 KLF5Q13887 457 aaPredicted RBP6.53□□□□□ -1.36
TPM1-213ENST00000558400 RPEL1Q2QD12 228 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 C15orf32Q32M92 178 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 PYDC2Q56P42 97 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 ACSM6Q6P461 480 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 Q8N402 240 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 GDPD1Q8N9F7 314 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 OR4D10Q8NGI6 311 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 MRAPQ8TCY5 172 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 ALX4Q9H161 411 aaPredicted RBP6.53□□□□□ -1.36
TPM1-213ENST00000558400 NDUFA4L2Q9NRX3 87 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 AURKAIP1Q9NWT8 199 aaPredicted RBP6.53□□□□□ -1.36
TPM1-213ENST00000558400 SLC2A8Q9NY64 477 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 CACFD1Q9UGQ2 172 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 FBXL7Q9UJT9 491 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 GPR132Q9UNW8 380 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 OR51B2Q9Y5P1 312 aa6.53□□□□□ -1.36
TPM1-213ENST00000558400 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.52□□□□□ -1.37
TPM1-213ENST00000558400 TRBV7-1A0A0A6YYK4 115 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 TEX13DA0A0J9YY54 714 aaPredicted RBP6.52□□□□□ -1.37
TPM1-213ENST00000558400 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 RBMXL2O75526 392 aaKnown RBP6.52□□□□□ -1.37
TPM1-213ENST00000558400 OR2J3O76001 311 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 PRH1P02810 166 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 OR13C7P0DN81 318 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 PI3P19957 117 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 SLURP1P55000 103 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 HSPE1P61604 102 aaKnown RBP6.52□□□□□ -1.37
TPM1-213ENST00000558400 DHODHQ02127 395 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 ZNF45Q02386 682 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 DEFB121Q5J5C9 76 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 CCDC190Q86UF4 302 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 TOMM5Q8N4H5 51 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 OR51S1Q8NGJ8 323 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 OR4C16Q8NGL9 310 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 OR6Q1Q8NGQ2 317 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 OR13C8Q8NGS7 320 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 MARCH1Q8TCQ1 289 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 LSM10Q969L4 123 aaKnown RBP6.52□□□□□ -1.37
TPM1-213ENST00000558400 EEF1AKMT3Q96AZ1 226 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 RRNAD1Q96FB5 475 aaKnown RBP6.52□□□□□ -1.37
TPM1-213ENST00000558400 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 ATP6V0BQ99437 205 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 TMEM14BQ9NUH8 114 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 MCUBQ9NWR8 336 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 PEMTQ9UBM1 199 aa6.52□□□□□ -1.37
TPM1-213ENST00000558400 IGLV11-55A0A075B6I3 123 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 A0A1B0GW64 132 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 CGB1A6NKQ9 187 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 C15orf61A6NNL5 157 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 GGCTO75223 188 aaKnown RBP6.51□□□□□ -1.37
TPM1-213ENST00000558400 SAP30O75446 220 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 CDS2O95674 445 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 PRB2P02812 416 aaPredicted RBP6.51□□□□□ -1.37
TPM1-213ENST00000558400 AREGP15514 252 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 UCP1P25874 307 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 AKR1C2P52895 323 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 PPP5CP53041 499 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 KRTAP10-11P60412 298 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 ERHP84090 104 aaKnown RBP6.51□□□□□ -1.37
TPM1-213ENST00000558400 EXOSC2Q13868 293 aaKnown RBP6.51□□□□□ -1.37
TPM1-213ENST00000558400 TRIM16LQ309B1 348 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 FAM106AQ4KMX7 169 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 SLC25A24Q6NUK1 477 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 FAM219AQ8IW50 185 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 SGPP2Q8IWX5 399 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 LINC00528Q8N1L1 170 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 OR9G4Q8NGQ1 327 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 MRGPRFQ96AM1 343 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 TP53RKQ96S44 253 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms