RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 OR51B2Q9Y5P1 312 aa5.96□□□□□ -1.45
VPS13C-206ENST00000558338 DSCAML1Q8TD84 2053 aa5.96□□□□□ -1.45
VPS13C-206ENST00000558338 USF3Q68DE3 2245 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HCFC1P51610 2035 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 TRAV3A0A0B4J244 114 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 UPK2O00526 184 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 SLC25A17O43808 307 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BKO60814 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 TRGC2P03986 189 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BJP06899 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 OR4A8P0C604 315 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 NDUFB7P17568 137 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BOP23527 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BBP33778 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 RPL29P47914 159 aaKnown RBP5.96□□□□□ -1.46
VPS13C-206ENST00000558338 GNG10P50151 68 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 LGALS4P56470 323 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 FAM3BP58499 235 aaPredicted RBP5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BDP58876 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 B2MP61769 119 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BCP62807 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 SSX2Q16385 188 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST2H2BEQ16778 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.96□□□□□ -1.46
VPS13C-206ENST00000558338 SPNS3Q6ZMD2 512 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 ZNF833PQ6ZTB9 187 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 FAM216BQ8N7L0 139 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 C8orf31Q8N9H6 132 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 DEFB108BQ8NET1 73 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 OR5B3Q8NH48 314 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 OR4A5Q8NH83 315 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BHQ93079 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 SLC35E1Q96K37 410 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 C16orf92Q96LL3 132 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 ZNF714Q96N38 554 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 IMMP2LQ96T52 175 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BNQ99877 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 HIST1H2BMQ99879 126 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 SSX3Q99909 188 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 PYGO2Q9BRQ0 406 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 SAP30LQ9HAJ7 183 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 GAR1Q9NY12 217 aaKnown RBP5.96□□□□□ -1.46
VPS13C-206ENST00000558338 TP53TG5Q9Y2B4 290 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 ZNF835Q9Y2P0 537 aa5.96□□□□□ -1.46
VPS13C-206ENST00000558338 MUC3AQ02505 3323 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 WDFY4Q6ZS81 3184 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 PPIAL4EA0A075B759 164 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 TRAV34A0A0B4J273 112 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 PPP5D1E7EU14 171 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 PPIAL4DF5H284 164 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 J3QR06 171 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 K7EM74 188 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 YIF1AO95070 293 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 PFN1P07737 140 aaKnown RBP5.95□□□□□ -1.46
VPS13C-206ENST00000558338 IL6RP08887 468 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-206ENST00000558338 PPIAL4FP0DN26 164 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 RPL31P62899 125 aaKnown RBP5.95□□□□□ -1.46
VPS13C-206ENST00000558338 LRRC10Q5BKY1 277 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 NCMAPQ5T1S8 102 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 CST9LP1Q5W188 147 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 SLC16A13Q7RTY0 426 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 ABHD12Q8N2K0 398 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 Q8N3U1 123 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 OR1L8Q8NGR8 309 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 VSTM2AQ8TAG5 236 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 NEUROG1Q92886 237 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 LEAP2Q969E1 77 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 ABHD17AQ96GS6 310 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 C19orf24Q9BVV8 132 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 OR51M1Q9H341 326 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 PPIAL4AQ9Y536 164 aa5.95□□□□□ -1.46
VPS13C-206ENST00000558338 A0A1W2PN81 502 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 DPRXA6NFQ7 191 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 INS-IGF2F8WCM5 200 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 TMEM178BH3BS89 294 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 NDUFB3O43676 98 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 CA2P00918 260 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 IGHV3-7P01780 117 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 TRGC1P0CF51 173 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 ARL14EPLP0DKL9 152 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 CT45A6P0DMU7 189 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 CT45A5P0DMU8 189 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 CT45A7P0DMV0 189 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 IL3RAP26951 378 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 CHRNA7P36544 502 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 LCN2P80188 198 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 BSPH1Q075Z2 132 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 C2orf83Q53S99 150 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 DNLZQ5SXM8 178 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 MIC13Q5XKP0 118 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 DUX4L9Q6RFH8 374 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-206ENST00000558338 PDPNQ86YL7 162 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 LINC00311Q8N616 119 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 STPG3Q8N7X2 389 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 OR51G1Q8NGK1 321 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 GATAD1Q8WUU5 269 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 ZCCHC14Q8WYQ9 949 aaKnown RBP5.94□□□□□ -1.46
VPS13C-206ENST00000558338 PERPQ96FX8 193 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 UHRF2Q96PU4 802 aa5.94□□□□□ -1.46
VPS13C-206ENST00000558338 NIT2Q9NQR4 276 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms