RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SSX8Q7RTT4 187 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ERASQ7Z444 233 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 LRP11Q86VZ4 500 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 FAM169BQ8N8A8 192 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 OR51G1Q8NGK1 321 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 PLPPR1Q8TBJ4 325 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM171Q8WVE6 324 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 IL1F10Q8WWZ1 152 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF837Q96EG3 531 aaPredicted RBP4.61□□□□□ -1.67
GABPB1-207ENST00000558335 NEIL1Q96FI4 390 aaPredicted RBP4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ADTRPQ96IZ2 230 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 RARRES2Q99969 163 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 SLC25A33Q9BSK2 321 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 C19orf24Q9BVV8 132 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 SFXN3Q9BWM7 321 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GTSF1LQ9H1H1 148 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 CXXC4Q9H2H0 198 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 RPRMQ9NS64 109 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 RABAC1Q9UI14 185 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TSSC4Q9Y5U2 329 aaPredicted RBP4.61□□□□□ -1.67
GABPB1-207ENST00000558335 LY96Q9Y6Y9 160 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TRAV24A0A0B4J272 114 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 IGKV1D-13A0A0B4J2D9 117 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 C5orf63A6NC05 138 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ZFP92A6NM28 416 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 LRRC30A6NM36 301 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 RNF223E7ERA6 249 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 F8W1H4 67 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 K7EP34 96 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 MLNRO43193 412 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 CLDN1O95832 211 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 NGFP01138 241 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 CGAP01215 116 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 SP1P08047 785 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 IGKV1-13P0DP09 117 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 CCL4P13236 92 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 KLK2P20151 261 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 EVI2AP22794 236 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 HTR1DP28221 377 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ID4P47928 161 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ATP5J2P56134 94 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ERVK11-1P61568 191 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 PPP1CBP62140 327 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 RHOBP62745 196 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 PSG9Q00887 426 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 SRSF1Q07955 248 aaKnown RBP eCLIP4.6□□□□□ -1.67
GABPB1-207ENST00000558335 FOXL1Q12952 345 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 P2RY6Q15077 328 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 VWC2Q2TAL6 325 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 PSMG4Q5JS54 123 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 FAM90A2PQ658T7 463 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 STUMQ69YW2 141 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 Q6P435 159 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 Q6ZS92 163 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 FGFRL1Q8N441 504 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 SMIM20Q8N5G0 67 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.6□□□□□ -1.67
GABPB1-207ENST00000558335 OR10G9Q8NGN4 311 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 OR13C6PQ8NH95 151 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM37Q8WXS4 190 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 RDH5Q92781 318 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 WDYHV1Q96HA8 205 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 UHRF2Q96PU4 802 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 HSPB9Q9BQS6 159 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 TTTY12Q9BZ98 90 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 NPFFR1Q9GZQ6 430 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 MS4A5Q9H3V2 200 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 GCM1Q9NP62 436 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 SIGLEC8Q9NYZ4 499 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 SIGLEC9Q9Y336 463 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 PPIAL4AQ9Y536 164 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 CHD9Q3L8U1 2897 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 ABCA7Q8IZY2 2146 aa4.6□□□□□ -1.67
GABPB1-207ENST00000558335 TRGV5A0A0B4J1U4 118 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 IGKV1-6A0A0C4DH72 117 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 DPRXA6NFQ7 191 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 M0R2Z0 102 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 TMPRSS2O15393 492 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 NKX2-8O15522 239 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 NEURL1O76050 574 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 OR2H2O95918 312 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 CXorf1O96002 111 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 KRASP01116 189 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 CELA2AP08217 269 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 RFPL3SP0C7P2 107 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 LINC00869P0C866 280 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 PATE4P0C8F1 98 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 GLI4P10075 376 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 CA6P23280 308 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 ID1P41134 155 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 OPRK1P41145 380 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 PI4KAP42356 2102 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 GALR1P47211 349 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 MEOX1P50221 254 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 TMPRSS3P57727 454 aa4.59□□□□□ -1.67
GABPB1-207ENST00000558335 YPEL3P61236 119 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms