RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 DEFB125Q8N687 156 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 CLDN22Q8N7P3 220 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 OR10G2Q8NGC3 310 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 OR9Q1Q8NGQ5 310 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 OR5B12Q96R08 314 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 ZNF184Q99676 751 aaPredicted RBP3.88□□□□□ -1.79
RTF1-204ENST00000558117 NIPSNAP1Q9BPW8 284 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 PAXXQ9BUH6 204 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 C9orf16Q9BUW7 83 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 RNF126Q9BV68 326 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 VCX3BQ9H321 246 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 SIAEQ9HAT2 523 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 TMEM100Q9NV29 134 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 ANAPC11Q9NYG5 84 aa3.88□□□□□ -1.79
RTF1-204ENST00000558117 DNAH8Q96JB1 4490 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 A0A1B0GWA3 101 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 LYRM9A8MSI8 78 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 IQCF6A8MYZ5 107 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 LRRN3E7EW58 273 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 M0QXV9 152 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 EIF3GO75821 320 aaKnown RBP eCLIP3.87□□□□□ -1.79
RTF1-204ENST00000558117 SOX14O95416 240 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 SLC2A10O95528 541 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 IGHG2P01859 326 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 RD3LP0DJH9 198 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 CT45A6P0DMU7 189 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 CT45A5P0DMU8 189 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 CT45A7P0DMV0 189 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 MUC1P15941 1255 aaPredicted RBP3.87□□□□□ -1.79
RTF1-204ENST00000558117 ZNF823P16415 610 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 RPS4Y1P22090 263 aaKnown RBP3.87□□□□□ -1.79
RTF1-204ENST00000558117 KIR2DS2P43631 304 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 UNC119Q13432 240 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 CT45A1Q5HYN5 189 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 FBXW12Q6X9E4 464 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 VKORC1L1Q8N0U8 176 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 NECAP1Q8NC96 275 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 OR11H6Q8NGC7 330 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 OR6K6Q8NGW6 343 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 PFN4Q8NHR9 129 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 CT45A3Q8NHU0 189 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 UBALD1Q8TB05 177 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 RASSF5Q8WWW0 418 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 SLC25A38Q96DW6 304 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 SEH1LQ96EE3 360 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 RARRES2Q99969 163 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 PARD6GQ9BYG4 376 aaPredicted RBP3.87□□□□□ -1.79
RTF1-204ENST00000558117 OR2H1Q9GZK4 316 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 ALX4Q9H161 411 aaPredicted RBP3.87□□□□□ -1.79
RTF1-204ENST00000558117 WFDC10AQ9H1F0 79 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 VCXQ9H320 206 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 SAV1Q9H4B6 383 aaPredicted RBP3.87□□□□□ -1.79
RTF1-204ENST00000558117 RNF167Q9H6Y7 350 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 TMEM27Q9HBJ8 222 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 RPS6KB2Q9UBS0 482 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 HHLA2Q9UM44 414 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 TP53TG1Q9Y2A0 90 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 GOLT1BQ9Y3E0 138 aa3.87□□□□□ -1.79
RTF1-204ENST00000558117 A0A087WUJ7 227 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 A0A087WUU8 490 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 A0A0A6YYH2 397 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 A0A1B0GTI1 187 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 TRAPPC13A5PLN9 417 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 TVP23AA6NH52 213 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 A6NJ64 397 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 H0Y980 276 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 SMKR1H3BMG3 65 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 SGCEO43556 437 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 DUSP14O95147 198 aaKnown RBP3.86□□□□□ -1.79
RTF1-204ENST00000558117 OR5F1O95221 314 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 GUSBP08236 651 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 P0DMU3 169 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 IFI30P13284 250 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 ZBTB25P24278 435 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 PSMB8P28062 276 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 CEACAM3P40198 252 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 UGT2B15P54855 530 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 CAV3P56539 151 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 SMIM11AP58511 58 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 UBE2KP61086 200 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 COPZ1P61923 177 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 PITPNAQ00169 270 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 RGS21Q2M5E4 152 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 NRMQ8IXM6 262 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 RDH10Q8IZV5 341 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 PACRGLQ8N7B6 248 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 ZNF555Q8NEP9 628 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 OR51A7Q8NH64 312 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 OR6X1Q8NH79 312 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 GNPDA2Q8TDQ7 276 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 DEFB104AQ8WTQ1 72 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 PHYHIPLQ96FC7 376 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 VSIG2Q96IQ7 327 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 UBE2E2Q96LR5 201 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 PRSS27Q9BQR3 290 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 AGMATQ9BSE5 352 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms