RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 PLEKHG7Q6ZR37 379 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 APRG1Q8IVJ8 170 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 BBS1Q8NFJ9 593 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 PXT1Q8NFP0 134 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 OR1L1Q8NH94 360 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 PINX1Q96BK5 328 aaKnown RBP4.84□□□□□ -1.63
SHC4-204ENST00000557797 MRPS24Q96EL2 167 aaKnown RBP4.84□□□□□ -1.63
SHC4-204ENST00000557797 TTTY10Q9BZA0 68 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 IFI27L2Q9H2X8 130 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 NEK6Q9HC98 313 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 OR2S2Q9NQN1 319 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 ZNF581Q9P0T4 197 aa4.84□□□□□ -1.63
SHC4-204ENST00000557797 EXOSC1Q9Y3B2 195 aaKnown RBP4.84□□□□□ -1.63
SHC4-204ENST00000557797 H7C2Y5 167 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 AIPO00170 330 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 NME4O00746 187 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 MAGEB4O15481 346 aaPredicted RBP4.83□□□□□ -1.64
SHC4-204ENST00000557797 YPEL1O60688 119 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 IGKV3-20P01619 116 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 CRYGBP07316 175 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 NPY1RP25929 384 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 FHITP49789 147 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 MNAT1P51948 309 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 CXCR4P61073 352 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 MED21Q13503 144 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 GNMTQ14749 295 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 C15orf32Q32M92 178 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 NHLRC3Q5JS37 347 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 SLC25A30Q5SVS4 291 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 C6orf183Q5T699 404 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 LIPKQ5VXJ0 399 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 GLT8D1Q68CQ7 371 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 Q6ZVQ6 151 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 GAPTQ8N292 157 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 AQP11Q8NBQ7 271 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 OR5AP2Q8NGF4 316 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 ZNRF2Q8NHG8 242 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 TEX47Q8TBZ9 253 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 GIPC3Q8TF64 312 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 TMEM37Q8WXS4 190 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 YPEL2Q96QA6 119 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 CNN2Q99439 309 aaKnown RBP4.83□□□□□ -1.64
SHC4-204ENST00000557797 YTHDF1Q9BYJ9 559 aaKnown RBP4.83□□□□□ -1.64
SHC4-204ENST00000557797 NKIRAS1Q9NYS0 192 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 JPT1Q9UK76 154 aa4.83□□□□□ -1.64
SHC4-204ENST00000557797 CCDC182A6NF36 153 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 OXTP01178 125 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 IGKV1-16P04430 117 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 MRPL3P09001 348 aaKnown RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 GIG44P09565 113 aaPredicted RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 UBCP0CG48 685 aaKnown RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 C4BPBP20851 252 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 PPP1CCP36873 323 aaKnown RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 CMC4P56277 68 aaPredicted RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 ARL16Q0P5N6 197 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 RIPK1Q13546 671 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 KISS1Q15726 138 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 SYT6Q5T7P8 510 aaPredicted RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 LAMTOR1Q6IAA8 161 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 UNQ9165/PRO28630Q6UXU0 137 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 DEFB104AQ8WTQ1 72 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 FGGYQ96C11 551 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 PYURFQ96I23 114 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 FNDC4Q9H6D8 234 aaPredicted RBP4.82□□□□□ -1.64
SHC4-204ENST00000557797 PIPOXQ9P0Z9 390 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 ING4Q9UNL4 249 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 GMPPBQ9Y5P6 360 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 TNXBP22105 4242 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
SHC4-204ENST00000557797 BOLA2-SMG1P6H3BVE0 249 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 RAB29O14966 203 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 MRPS14O60783 128 aaKnown RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 OR7C1O76099 320 aaPredicted RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 CCNB2O95067 398 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 IGLV2-23P01705 113 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 PRH1P02810 166 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 HMGN1P05114 100 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 FABP3P05413 133 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 OCM2P0CE71 109 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 OCMP0CE72 109 aaPredicted RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 RCC1P18754 421 aaPredicted RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 PSMB6P28072 239 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 PSMD7P51665 324 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 RBM11P57052 281 aaKnown RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 RPS27AP62979 156 aaKnown RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 MAPRE2Q15555 327 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 MPV17LQ2QL34 196 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 DMKNQ6E0U4 476 aaPredicted RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 STX19Q8N4C7 294 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 OR10AC1Q8NH08 325 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 MCUR1Q96AQ8 359 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 RAB40CQ96S21 281 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 KCTD14Q9BQ13 255 aaPredicted RBP4.81□□□□□ -1.64
SHC4-204ENST00000557797 GORASP2Q9H8Y8 452 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 TAF9BQ9HBM6 251 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 SLC2A9Q9NRM0 540 aa4.81□□□□□ -1.64
SHC4-204ENST00000557797 TRAPPC2LQ9UL33 140 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms