RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 AKR1C4P17516 323 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 HLA-GP17693 338 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 MAS1LP35410 378 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 ZNF616Q08AN1 781 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
NEK9-211ENST00000557673 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 ASPHD1Q5U4P2 390 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 CENPSQ8N2Z9 138 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 MINDY2Q8NBR6 621 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 LFNGQ8NES3 379 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 OR1N2Q8NGR9 330 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 CASTOR1Q8WTX7 329 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 ZMAT4Q9H898 229 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 FOXA2Q9Y261 457 aaPredicted RBP12.84□□□□□ -0.35
NEK9-211ENST00000557673 NUBP2Q9Y5Y2 271 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 EPPK1P58107 5090 aaKnown RBP12.84□□□□□ -0.35
NEK9-211ENST00000557673 BIRC6Q9NR09 4857 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 A0A1W2PN81 502 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 IGKV1-5P01602 117 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 OR9G9P0C7N8 305 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 P0C879 139 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 CHRNA7P36544 502 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 RPL27AP46776 148 aaKnown RBP12.83□□□□□ -0.36
NEK9-211ENST00000557673 AKR1C2P52895 323 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 RUNX1Q01196 453 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 IFITM3Q01628 133 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 DHODHQ02127 395 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 TMEM128Q5BJH2 165 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 UNQ5815/PRO19632Q6UWF5 114 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 ZNF491Q8N8L2 437 aa12.83□□□□□ -0.36
NEK9-211ENST00000557673 SORL1Q92673 2214 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 A0A1B0GW64 132 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 C15orf61A6NNL5 157 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 TEX22C9J3V5 150 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 CDS2O95674 445 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 MYOD1P15172 320 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 RAB9AP51151 201 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 OR2B8PP59922 312 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 UBE2MP61081 183 aaKnown RBP12.82□□□□□ -0.36
NEK9-211ENST00000557673 TMEM267Q0VDI3 215 aaPredicted RBP12.82□□□□□ -0.36
NEK9-211ENST00000557673 TMEM187Q14656 261 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 SLC25A42Q86VD7 318 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 RBPMSQ93062 196 aaKnown RBP12.82□□□□□ -0.36
NEK9-211ENST00000557673 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 PHB2Q99623 299 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 SPIN2AQ99865 258 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 SPIN2BQ9BPZ2 258 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 C20orf85Q9H1P6 137 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 PRR13Q9NZ81 148 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 FLVCR2Q9UPI3 526 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 TENM2Q9NT68 2774 aa12.82□□□□□ -0.36
NEK9-211ENST00000557673 DYNC2H1Q8NCM8 4307 aaKnown RBP12.81□□□□□ -0.36
NEK9-211ENST00000557673 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 I3L521 148 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 ATG12O94817 140 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 PPP1R1AQ13522 171 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 H2BFWTQ7Z2G1 175 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 IL22RA2Q969J5 263 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
NEK9-211ENST00000557673 DNAH7Q8WXX0 4024 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 A0A0G2JRQ6 117 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 MSGN1A6NI15 193 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 E7EUB6 86 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 OVOL1O14753 267 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 APELAP0DMC3 54 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 ANXA3P12429 323 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 VAMP1P23763 118 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 SRPXP78539 464 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 IZUMO4Q1ZYL8 232 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 SELENOHQ8IZQ5 122 aaKnown RBP12.8□□□□□ -0.36
NEK9-211ENST00000557673 TMEM68Q96MH6 324 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
NEK9-211ENST00000557673 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 ALX4Q9H161 411 aaPredicted RBP12.8□□□□□ -0.36
NEK9-211ENST00000557673 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
NEK9-211ENST00000557673 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 SAP30O75446 220 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 SNAPC5O75971 98 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 SFT2D2O95562 160 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 TCRBP04435 133 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 THOC7Q6I9Y2 204 aaKnown RBP12.79□□□□□ -0.36
NEK9-211ENST00000557673 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
NEK9-211ENST00000557673 FYTTD1Q96QD9 318 aaKnown RBP12.79□□□□□ -0.36
NEK9-211ENST00000557673 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
NEK9-211ENST00000557673 LCE6AA0A183 80 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 FAM240BA0A1B0GVZ2 78 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 IGLC7A0M8Q6 106 aa12.78□□□□□ -0.36
NEK9-211ENST00000557673 HMX3A6NHT5 357 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms