RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 OR1L6Q8NGR2 347 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 FAM110DQ8TAY7 271 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 CASTOR1Q8WTX7 329 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 RBMXL1Q96E39 390 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 NOL4LQ96MY1 436 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 CITED1Q99966 193 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 TRAV3A0A0B4J244 114 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 A0A0B4J293 547 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 TEX50A0A1B0GTY4 177 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 CRYGCP07315 174 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 PSMB8P28062 276 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 SPCS3P61009 180 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 CD83Q01151 205 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 ECSCRQ19T08 205 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 KLK9Q2XQG4 91 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 MDFIQ99750 246 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 FBXO7Q9Y3I1 522 aa11.07□□□□□ -0.64
SUPT16H-208ENST00000557652 DBX1A6NMT0 343 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 TEX22C9J3V5 150 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 ATP5IP56385 69 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 TMEM65Q6PI78 240 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 LYZL2Q7Z4W2 148 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 C12orf45Q8N5I9 185 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 GPR146Q96CH1 333 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 CACNG5Q9UF02 275 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 WSB1Q9Y6I7 421 aa11.06□□□□□ -0.64
SUPT16H-208ENST00000557652 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 IGLC7A0M8Q6 106 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 G3V318 75 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 MED6O75586 246 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 PSMB6P28072 239 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 ERHP84090 104 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 ZNF114Q8NC26 417 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 MYOZ3Q8TDC0 251 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 TAF15Q92804 592 aaKnown RBP eCLIP11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 USMG5Q96IX5 58 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 FYTTD1Q96QD9 318 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 FAM103A1Q9BTL3 118 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 ENY2Q9NPA8 101 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 THYN1Q9P016 225 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 TENM1Q9UKZ4 2725 aa11.05□□□□□ -0.64
SUPT16H-208ENST00000557652 A0A0G2JRQ6 117 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 ST8SIA3O43173 380 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 PITX3O75364 302 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 IFNA17P01571 189 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 CTRB1P17538 263 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 C10orf55Q5SWW7 151 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 ASPHD1Q5U4P2 390 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 GGNBP1Q5YKI7 109 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 CTRB2Q6GPI1 263 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 ZNF329Q86UD4 541 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 NOXA1Q86UR1 476 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 UBE2E2Q96LR5 201 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 LINC00527Q9UJ94 153 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 NSG2Q9Y328 171 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 WNK1Q9H4A3 2382 aa11.04□□□□□ -0.64
SUPT16H-208ENST00000557652 C7orf66A4D0T2 115 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 CGB1A6NKQ9 187 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 FAM223BA6NKX1 122 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 HOXB5P09067 269 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 RAB9AP51151 201 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 SUB1P53999 127 aaKnown RBP eCLIP11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 OXA1LQ15070 435 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 Q6ZRM9 215 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 OR2C3Q8N628 320 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 OR1S1Q8NH92 325 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 SEC22CQ9BRL7 303 aa11.03□□□□□ -0.64
SUPT16H-208ENST00000557652 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 A0A1B0GW64 132 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 E7EUB6 86 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 CORTO00230 105 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 SOX15O60248 233 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 OR13C7P0DN81 318 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 PF4V1P10720 104 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 DEFA4P12838 97 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 RPL23AP62750 156 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 TNFRSF9Q07011 255 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 C2orf68Q2NKX9 166 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 NECAP1Q8NC96 275 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 OR52B4Q8NGK2 314 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 OR1P1Q8NH06 330 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 ATP6V0BQ99437 205 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 HIPK2Q9H2X6 1198 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 PRR13Q9NZ81 148 aa11.02□□□□□ -0.65
SUPT16H-208ENST00000557652 HMX3A6NHT5 357 aa11.01□□□□□ -0.65
SUPT16H-208ENST00000557652 M0QZ24 198 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms