RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 ANKRD55Q3KP44 614 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 PRR31Q5SQ13 230 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 MZT2BQ6NZ67 158 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 C8orf86Q6ZUL3 223 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 TTC9CQ8N5M4 171 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 OR10W1Q8NGF6 305 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 OR5B3Q8NH48 314 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 RRNAD1Q96FB5 475 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 SLA2Q9H6Q3 261 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 GNB4Q9HAV0 340 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 NDUFA4L2Q9NRX3 87 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 A0A0B4J293 547 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 RBMXL2O75526 392 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 PRH1P02810 166 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 TRAPPC2P0DI81 140 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 TRAPPC2BP0DI82 140 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 CDX1P47902 265 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 THOC7Q6I9Y2 204 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 Q6ZRM9 215 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 FAM219AQ8IW50 185 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 LGI3Q8N145 548 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 OR4F17Q8NGA8 305 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 LSM10Q969L4 123 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 GPR146Q96CH1 333 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 UBE2E2Q96LR5 201 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 OR4F4Q96R69 305 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 SRSF8Q9BRL6 282 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 NUDT15Q9NV35 164 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
VIPAS39-210ENST00000557466 TRAV6A0A075B6T7 132 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 A0A0B4J2A0 478 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 FAM240BA0A1B0GVZ2 78 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 C9orf170A2RU37 121 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 BRI3O95415 125 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 HLA-AP01891 365 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 CRYGCP07315 174 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 OR4E1P0C645 316 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 CTRB1P17538 263 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 PSMB6P28072 239 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 DHRS2Q13268 280 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 DEFB136Q30KP8 78 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 CTRB2Q6GPI1 263 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 ETV3LQ6ZN32 361 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 LYG2Q86SG7 212 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 ZNF429Q86V71 674 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 C4orf3Q8WVX3 66 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 OR5B12Q96R08 314 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 CACNG5Q9UF02 275 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 SHPKQ9UHJ6 478 aa11.53□□□□□ -0.56
VIPAS39-210ENST00000557466 IGHV3-11P01762 117 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 SPINK9Q5DT21 86 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 NMSQ5H8A3 153 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 WNK1Q9H4A3 2382 aa11.52□□□□□ -0.57
VIPAS39-210ENST00000557466 TRBV9A0A0B4J1U6 114 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 DUXBA0A1W2PPF3 345 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 H2AFB2P0C5Z0 115 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 OR13C7P0DN81 318 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 RHOGP84095 191 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 AARDQ4LEZ3 155 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 TREML4Q6UXN2 200 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 HSD17B13Q7Z5P4 300 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 OR52B4Q8NGK2 314 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 FANCD2OSQ96PS1 177 aa11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 ALX4Q9H161 411 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-210ENST00000557466 I3L521 148 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 OR2J3O76001 311 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 PF4P02776 101 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 LGALS1P09382 135 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 SULT1A3P0DMM9 295 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 SULT1A4P0DMN0 295 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 RAB25P57735 213 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 DEFA1P59665 94 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 DEFA3P59666 94 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 RUNX1Q01196 453 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 NRARPQ7Z6K4 114 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 PDCD10Q9BUL8 212 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 PLEKHA3Q9HB20 300 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 DMRT1Q9Y5R6 373 aa11.5□□□□□ -0.57
VIPAS39-210ENST00000557466 IGLV11-55A0A075B6I3 123 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 PIGBOS1A0A0B4J2F0 54 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 C13orf42A0A1B0GVH6 325 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 CCL24O00175 119 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 NXPH3O95157 252 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 DUS4LO95620 317 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms