RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 BAXQ07812 192 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 LTC4SQ16873 150 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 C17orf58Q2M2W7 97 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 MORN2Q502X0 79 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 UTF1Q5T230 341 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 HEPN1Q6WQI6 88 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 RAB40CQ96S21 281 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 AGMATQ9BSE5 352 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 CALYQ9NYX4 217 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 RNF150Q9ULK6 438 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 IGHV3-43A0A0B4J1X8 118 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 KBTBD11-OT1A0A1B0GTJ5 212 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 ZNF729A6NN14 1252 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-230ENST00000557427 KRBOX1C9JBD0 128 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 SSSCA1O60232 199 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 SEC11BP0C7V7 166 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 P0C879 139 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 IGHV3-43DP0DP04 118 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 ZP3P21754 424 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 CD24P25063 80 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 SULT1A2P50226 295 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 PRRX1P54821 245 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
SHMT2-230ENST00000557427 MINOS1Q5TGZ0 78 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 FAM53AQ6NSI3 398 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-230ENST00000557427 TMEM252Q8N6L7 170 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 OR4P4Q8NGL7 312 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 BSCL2Q96G97 398 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-230ENST00000557427 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
SHMT2-230ENST00000557427 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 SMIM3Q9BZL3 60 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 WNT10AQ9GZT5 417 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 DPM3Q9P2X0 92 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 GNG12Q9UBI6 72 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 CACNG5Q9UF02 275 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 PSG11Q9UQ72 335 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 MINOS1-NBL1R4GNA1 71 aa9.91□□□□□ -0.82
SHMT2-230ENST00000557427 RAB19A4D1S5 217 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 A6NDX4 124 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 ST8SIA5O15466 376 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 GPR12P47775 334 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 RAB7AP51149 207 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 CAV2P51636 162 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 PAX9P55771 341 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 TAS2R30P59541 319 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 RPL23AP62750 156 aaKnown RBP9.9□□□□□ -0.82
SHMT2-230ENST00000557427 NHLH2Q02577 135 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 Q6ZRM9 215 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 CCDC28AQ8IWP9 274 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 Q8N2B8 174 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-230ENST00000557427 ZNF596Q8TC21 504 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 CD300LFQ8TDQ1 290 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 LEAP2Q969E1 77 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 NPFFR1Q9GZQ6 430 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 MAGT1Q9H0U3 335 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 WFDC1Q9HC57 220 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 GFOD1Q9NXC2 390 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 TCF19Q9Y242 345 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 WSB1Q9Y6I7 421 aa9.9□□□□□ -0.82
SHMT2-230ENST00000557427 RAB29O14966 203 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 SYNGR2O43760 224 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
SHMT2-230ENST00000557427 BLOC1S1P78537 153 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 ZNF266Q14584 549 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 Q3ZCU0 254 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 OR10A7Q8NGE5 316 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 OR1S2Q8NGQ3 325 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 MARC2Q969Z3 335 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 IFI27L2Q9H2X8 130 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 PITPNC1Q9UKF7 332 aa9.89□□□□□ -0.83
SHMT2-230ENST00000557427 A0A1W2PPE3 182 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-230ENST00000557427 BUB1B-PAK6H3BSN5 160 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.835e-15■■■■■ 33.3
SHMT2-230ENST00000557427 MED6O75586 246 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 TMEM50AO95807 157 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 IGLV1-47P01700 117 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 SPP1P10451 314 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 BRS3P32247 399 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 KIR2DS2P43631 304 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 ARHGDIBP52566 201 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 BRWD1-AS2P59051 145 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 BLCAPP62952 87 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 ARSJQ5FYB0 599 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-230ENST00000557427 IL34Q6ZMJ4 242 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 Q6ZS46 218 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 ODF3L1Q8IXM7 274 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 STPG2Q8N412 459 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 OR9G1Q8NH87 305 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 ASCL2Q99929 193 aa9.88□□□□□ -0.83
SHMT2-230ENST00000557427 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms