RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 CLEC3BP05452 202 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 GPR183P32249 361 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 WT1-ASQ06250 92 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 SCGB2B2Q4G0G5 96 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 FAM209BQ5JX69 171 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 SLC25A24Q6NUK1 477 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 ADAMTSL5Q6ZMM2 481 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 Q8N1Y9 231 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 Q8N402 240 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 OR4D10Q8NGI6 311 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 CACNG8Q8WXS5 425 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 MTFP1Q9UDX5 166 aa12.56□□□□□ -0.4
VSX1-207ENST00000557285 TRBV7-1A0A0A6YYK4 115 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 C2orf70A6NJV1 201 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 NOL3O60936 208 aaKnown RBP12.55□□□□□ -0.4
VSX1-207ENST00000557285 SERPINE2P07093 398 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 FOLR2P14207 255 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 UCP3P55916 312 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
VSX1-207ENST00000557285 H2BFWTQ7Z2G1 175 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 GDPD1Q8N9F7 314 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 LSM10Q969L4 123 aaKnown RBP12.55□□□□□ -0.4
VSX1-207ENST00000557285 CXorf58Q96LI9 332 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 SRSF8Q9BRL6 282 aaKnown RBP12.55□□□□□ -0.4
VSX1-207ENST00000557285 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
VSX1-207ENST00000557285 CYB5BO43169 146 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 PIGPP57054 158 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 IZUMO4Q1ZYL8 232 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 FAAP20Q6NZ36 180 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 OR4A16Q8NH70 328 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
VSX1-207ENST00000557285 SIGLEC8Q9NYZ4 499 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 THYN1Q9P016 225 aa12.54□□□□□ -0.4
VSX1-207ENST00000557285 OR2T8A6NH00 312 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 C15orf61A6NNL5 157 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 RAB3DO95716 219 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 FGF2P09038 288 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 TAS2R19P59542 299 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 IL18Q14116 193 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
VSX1-207ENST00000557285 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 TMEM229BQ8NBD8 167 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 UBAC2Q8NBM4 344 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 ZNF502Q8TBZ5 544 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 DYNC2LI1Q8TCX1 351 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 DIRAS2Q96HU8 199 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 RCHY1Q96PM5 261 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
VSX1-207ENST00000557285 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 TBPP20226 339 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 MFAP2P55001 183 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 TMBIM6P55061 237 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 CD81P60033 236 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 KLK9Q2XQG4 91 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 SP6Q3SY56 376 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 SPINK9Q5DT21 86 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 PLET1Q6UQ28 207 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 UNQ9165/PRO28630Q6UXU0 137 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.41
VSX1-207ENST00000557285 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 GPHB5Q86YW7 130 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 ARRDC1Q8N5I2 433 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
VSX1-207ENST00000557285 SEC22AQ96IW7 307 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 TMEM56Q96MV1 263 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 TP53RKQ96S44 253 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 PLEKHA3Q9HB20 300 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 FKBP11Q9NYL4 201 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 CCDC59Q9P031 241 aaKnown RBP12.52□□□□□ -0.41
VSX1-207ENST00000557285 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 KLK9Q9UKQ9 250 aa12.52□□□□□ -0.41
VSX1-207ENST00000557285 F11RQ9Y624 299 aaKnown RBP12.52□□□□□ -0.41
VSX1-207ENST00000557285 LGALS9O00182 355 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 CBLN1P23435 193 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 PTBP1P26599 531 aaKnown RBP eCLIP12.51□□□□□ -0.41
VSX1-207ENST00000557285 RPL5P46777 297 aaKnown RBP12.51□□□□□ -0.41
VSX1-207ENST00000557285 TRIM16LQ309B1 348 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 OR13C8Q8NGS7 320 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 OR5B3Q8NH48 314 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 MARCH1Q8TCQ1 289 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 MISP3Q96FF7 219 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 THAP7Q9BT49 309 aaPredicted RBP12.51□□□□□ -0.41
VSX1-207ENST00000557285 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
VSX1-207ENST00000557285 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
VSX1-207ENST00000557285 IGHV3OR16-8A0A075B7F1 116 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 TMEM213A2RRL7 107 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms