RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 HOGA1Q86XE5 327 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 KIR2DL5AQ8N109 375 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 OR51H1Q8NH63 302 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 KIR2DL5BQ8NHK3 375 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 RNF183Q96D59 192 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 SLC25A38Q96DW6 304 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 RPA2P15927 270 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 PSMB9P28065 219 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 HSPA13P48723 471 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 DMBX1Q8NFW5 382 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 OR5H6Q8NGV6 325 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 BSCL2Q96G97 398 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 PLEKHA2Q9HB19 425 aa13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 KLK5Q9Y337 293 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-209ENST00000556909 TRAV18A0A075B6X5 111 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 CYB5BO43169 146 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 FCER2P06734 321 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 SERPINE2P07093 398 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 TMEM17Q86X19 198 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 STPG3Q8N7X2 389 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 KRTAP17-1Q9BYP8 105 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 COMMD9Q9P000 198 aa13.53□□□□□ -0.24
VIPAS39-209ENST00000556909 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 OR4C46A6NHA9 309 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 NDUFA4O00483 81 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 MRPS14O60783 128 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 TRAPPC2P0DI81 140 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 TRAPPC2BP0DI82 140 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 RPL35AP18077 110 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 SDC2P34741 201 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 MFAP2P55001 183 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 SLC25A24Q6NUK1 477 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 RPP25LQ8N5L8 163 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 CHRDL1Q9BU40 450 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 C20orf24Q9BUV8 137 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 SSR3Q9UNL2 185 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 ETV7Q9Y603 341 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 VPS13DQ5THJ4 4388 aa13.52□□□□□ -0.25
VIPAS39-209ENST00000556909 IGHV3-21A0A0B4J1V1 117 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 F8W735 103 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 CLEC2LP0C7M8 214 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 SCAND1P57086 179 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 MXD1Q05195 221 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 HSD17B13Q7Z5P4 300 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 SPARTQ8N0X7 666 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 TMEM217Q8N7C4 229 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 GIMAP1Q8WWP7 306 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 GALNT14Q96FL9 552 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 C21orf62Q9NYP8 219 aa13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 F11RQ9Y624 299 aaKnown RBP13.51□□□□□ -0.25
VIPAS39-209ENST00000556909 HERC2O95714 4834 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 A0A0A6YYH2 397 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 A6NJ64 397 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 MARCH11A6NNE9 402 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 ZNF207O43670 478 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 FCGR2BP31994 310 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 ADMP35318 185 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 ERVK-16P61578 105 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 OR5AP2Q8NGF4 316 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 OR1L8Q8NGR8 309 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 SCARB1Q8WTV0 552 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 FCGR1BQ92637 280 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 LSM10Q969L4 123 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 ATP6V0BQ99437 205 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 AUNIPQ9H7T9 357 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 NDUFA4L2Q9NRX3 87 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 RAB26Q9ULW5 256 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 HECTD4Q9Y4D8 3996 aa13.5□□□□□ -0.25
VIPAS39-209ENST00000556909 K7EIM0 57 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 K7EMT4 169 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 DEDDO75618 318 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 GNRHRP30968 328 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 HERV-K104P61576 105 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 IDNKQ5T6J7 187 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 UBAC2Q8NBM4 344 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 PHLDA1Q8WV24 401 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
VIPAS39-209ENST00000556909 DNAH6Q9C0G6 4158 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 RLN1P04808 185 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 APRG1Q8IVJ8 170 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 NSG2Q9Y328 171 aa13.48□□□□□ -0.25
VIPAS39-209ENST00000556909 OR51B2Q9Y5P1 312 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms