RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 STPG3Q8N7X2 389 aa10.94□□□□□ -0.66
CHD8-211ENST00000556833 SLC25A38Q96DW6 304 aa10.94□□□□□ -0.66
CHD8-211ENST00000556833 SPAG8Q99932 426 aaPredicted RBP10.94□□□□□ -0.66
CHD8-211ENST00000556833 QTRT1Q9BXR0 403 aaKnown RBP10.94□□□□□ -0.66
CHD8-211ENST00000556833 ZNF436Q9C0F3 470 aaPredicted RBP10.94□□□□□ -0.66
CHD8-211ENST00000556833 C5orf66Q9H5L9 145 aa10.94□□□□□ -0.66
CHD8-211ENST00000556833 HPRT1P00492 218 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 CTSDP07339 412 aaPredicted RBP10.93□□□□□ -0.66
CHD8-211ENST00000556833 NQO2P16083 231 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 GALP22466 123 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 PTBP1P26599 531 aaKnown RBP eCLIP10.93□□□□□ -0.669e-8■□□□□ 9.5
CHD8-211ENST00000556833 SDC2P34741 201 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 TAS2R31P59538 309 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 Q56UQ5 140 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 IDNKQ5T6J7 187 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 Q6ZWC4 215 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 GDPD1Q8N9F7 314 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 RNF183Q96D59 192 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
CHD8-211ENST00000556833 THYN1Q9P016 225 aa10.93□□□□□ -0.66
CHD8-211ENST00000556833 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
CHD8-211ENST00000556833 IGHV3OR16-13A0A075B7E8 117 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 IGHV3-74A0A0B4J1X5 117 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 TEX50A0A1B0GTY4 177 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 TSPAN4O14817 238 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 RLN1P04808 185 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 TRAPPC2P0DI81 140 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 TRAPPC2BP0DI82 140 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 ELLP55199 621 aaPredicted RBP10.92□□□□□ -0.66
CHD8-211ENST00000556833 KLK9Q2XQG4 91 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 HOGA1Q86XE5 327 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 WFDC3Q8IUB2 231 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 PHLDA1Q8WV24 401 aaPredicted RBP10.92□□□□□ -0.66
CHD8-211ENST00000556833 FBXL17Q9UF56 701 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 KLK9Q9UKQ9 250 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 SSR3Q9UNL2 185 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 TP53TG1Q9Y2A0 90 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 DNAH10Q8IVF4 4471 aa10.92□□□□□ -0.66
CHD8-211ENST00000556833 LOC100506127A0A0U1RQW1 187 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 DEFB4AO15263 64 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 SCGNO76038 276 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 IGHV3-48P01763 117 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 SERPINE2P07093 398 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 NANOS2P60321 138 aaKnown RBP10.91□□□□□ -0.66
CHD8-211ENST00000556833 HERV-K104P61576 105 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 ERVK-16P61578 105 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 LAMTOR1Q6IAA8 161 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 GBGT1Q8N5D6 347 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 CD300LFQ8TDQ1 290 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 AIFM2Q9BRQ8 373 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 C21orf62Q9NYP8 219 aa10.91□□□□□ -0.66
CHD8-211ENST00000556833 OR4C46A6NHA9 309 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 F8W735 103 aaPredicted RBP10.9□□□□□ -0.66
CHD8-211ENST00000556833 RBFOX2O43251 390 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHD8-211ENST00000556833 KRASP01116 189 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 FGF9P31371 208 aaPredicted RBP10.9□□□□□ -0.66
CHD8-211ENST00000556833 ADMP35318 185 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 G6PCP35575 357 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 UBE2UQ5VVX9 321 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 TPRA1Q86W33 373 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 SPARTQ8N0X7 666 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 ZBTB34Q8NCN2 500 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 OR1L8Q8NGR8 309 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 VN1R17PQ8TDU5 208 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 BSCL2Q96G97 398 aaPredicted RBP10.9□□□□□ -0.66
CHD8-211ENST00000556833 RNF2Q99496 336 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 VCX3BQ9H321 246 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 IFT46Q9NQC8 304 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 EHFQ9NZC4 300 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 OR51B2Q9Y5P1 312 aa10.9□□□□□ -0.66
CHD8-211ENST00000556833 MARCH11A6NNE9 402 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 NDUFA4O00483 81 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 UBE2CO00762 179 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 CYB5BO43169 146 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 YIF1AO95070 293 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 PMP2P02689 132 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 LPAR6P43657 344 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 HSPA13P48723 471 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 GABARAPL2P60520 117 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 POU2AF1Q16633 256 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 GALNT14Q96FL9 552 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 AUNIPQ9H7T9 357 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 PLEKHA2Q9HB19 425 aa10.89□□□□□ -0.67
CHD8-211ENST00000556833 F11RQ9Y624 299 aaKnown RBP10.89□□□□□ -0.67
CHD8-211ENST00000556833 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 DBX1A6NMT0 343 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 K7EIM0 57 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 GNRHRP30968 328 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 RFX2P48378 723 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 MSMO1Q15800 293 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 TSPAN14Q8NG11 270 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 OR5AP2Q8NGF4 316 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 FCAMRQ8WWV6 532 aa10.88□□□□□ -0.67
CHD8-211ENST00000556833 LSM10Q969L4 123 aaKnown RBP10.88□□□□□ -0.67
CHD8-211ENST00000556833 MISP3Q96FF7 219 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms